About the genus the model organism Arabidopsis thaliana taxobox image Arabidopsis thaliana.jpg image caption Thale Cress Arabidopsis thaliana regnum Plantae unranked divisio Angiosperms unranked classis Eudicots unranked ordo Rosids ordo Brassicales familia Brassicaceae genus Arabidopsis genus authority ... text. Arabidopsis Syllable stress of Botanical Latin A ra bi d p sis , rockcress is a genus in the family ... . This genus is of great interest since it contains thale cress Arabidopsis thaliana , one of the model ... Arabidopsis has nine species and a further eight subspecies recognised. This delimitation is quite ... and others. Their findings confirm that the species formerly included in Arabidopsis made it polyphyletic ... and three species of Arabis into Arabidopsis , but excludes 50 that have been moved into the new ... . All of the species in Arabidopsis are indigenous to Europe , while two of the species have broad ranges also extending into North America and Asia . In the last two decades, Arabidopsis thaliana ... aspects of plant biology. http www.arabidopsis.org The Arabidopsis Information Resource TAIR is a curated online information source for Arabidopsis thaliana genetic and molecular biology research, and http www.aspb.org publications arabidopsis The Arabidopsis Book is an online compilation of invited chapters on Arabidopsis thaliana biology. In Europe, the model organism resource centre for Arabidopsis ... Arabidopsis Stock Centre Nottingham Arabidopsis Stock Centre NASC whilst in North America germplasm services are provided by the Arabidopsis Biological Resource Center , ABRC based at the Ohio ... The Arabidopsis Information Resource TAIR database in June 2001 whilst NASC has always since 1991 hosted its own ordering system and genome browser. Arabidopsis thaliana in semi in vitro conditions It has been recently shown that Arabidopsis thaliana tissues could be cultivated in microfluidic ... reproduction in Arabidopsis thaliana. ref cite journal author AK Yetisen, L Jiang, J R Cooper ... more details
Brassicales familia Brassicaceae genus Arabidopsis species A. lyrata binomial Arabidopsis lyrata binomial authority Carl Linnaeus L. O Kane & Al Shehbaz synonyms Arabis lyrata au Carl Linnaeus L. Arabidopsis ... organism Arabidopsis thaliana . Description Arabidopsis lyrata are diploid plants that have ... 2008 title Lyre leaved Rock cress Arabidopsis lyrata L. O Kane & Al Shehbaz accessdate October 5, 2011 ... info nhfacts arabidopsis lyrata.pdf ref The stem leaves are arranged alternately, with linear and slightly curved margins that are smooth and having a base that is tapered. ref name MDW The leaves of Arabidopsis ... and produces fruits in early August. ref name MDW The fruit of Arabidopsis lyrata are about convert ... in a row . ref name MDW Habitat and range Arabidopsis lyrata is found largely in subarctic ... asexually through clonal patches. ref name MDW Lastly, Arabidopsis does not survive in agro ... 2288 4 ref Arabidopsis lyrata has a circumpolar distribution , meaning it is found across northern ... populations of Arabidopsis lyrata journal PLoS ONE volume 3 issue 6 page e2411 doi 10.1371 journal.pone.0002411 ... areas of Sweden. ref name Ratcliffe Conservation Arabidopsis lyrata has a large geographic range, but is often ... States, which include Ohio, Vermont, and Massachusetts. ref name Anderson Nevertheless, Arabidopsis ... populations, within Europe, of Arabidopsis lyrata ssp. petraea have been shown to be metabolically ... metabolic phenotypes of Arabidopsis lyrata ssp. petraea. New Phytologist 177 2 . 380 388 ref ref ... metabolic phenotypes of Arabidopsis lyrata ssp. petraea. Metabolomics 5 138 149 ref . Importance to humans Arabidopsis species provide the ability to address questions in speciation research due to the fact that they have a relatively short reproductive cycle and are easy to maintain. Also, Arabidopsis ... Ben Hunter & Kirsten Bomblies year 2010 title Progress and promise in using Arabidopsis to study adaptation, divergence, and speciation journal The Arabidopsis Book The Arabidopsis Book volume 8 pages ... more details
taxobox image Arabidopsis thaliana.jpg regnum Plantae unranked divisio Angiosperms unranked classis Eudicots unranked ordo Rosids ordo Brassicales familia Brassicaceae genus Arabidopsis species A. thaliana binomial Arabidopsis thaliana binomial authority Carolus Linnaeus L. Heynh. range map Arabidopsis thaliana distribution.png synonyms Arabis thaliana Arabidopsis thaliana Syllable stress of Botanical Latin A ra bi d p sis tha li na thale cress , mouse ear cress or arabidopsis is a small flowering ... Network http www.ars grin.gov cgi bin npgs html taxon.pl?3769 Arabidopsis thaliana ref A spring annual plant annual with a relatively short life cycle, Arabidopsis is a popular model organism in plant biology and genetics. Arabidopsis thaliana has a relatively small genome for a complex, multicellular ... the smallest genome of all flowering plants, ref .. Arabidopsis has been reported to have the smallest genome known among flowering plants Leutwileret al., 1984 . In our survey Arabidopsis ... ref but the smallest ..., 8 770 777. ref Arabidopsis was the first plant genome to be sequenced, and is a popular tool for understanding ... siliquosa . In 1841, the plant was renamed Arabidopsis thaliana by German botanist Gustav Heynhold in honor of Thal. The genus name, Arabidopsis comes from Greek, meaning resembling Arabis . Habitat, morphology, and life cycle Arabidopsis is native to Europe , Asia , and northwestern Africa ... beschrijving&menuentry soorten&id 2273 Arabidopsis thaliana ref ref name blamey Blamey, M. & Grey ... of Pakistan http www.efloras.org florataxon.aspx?flora id 5&taxon id 200009201 Arabidopsis thaliana ... Arabidopsis thaliana ref Roots are simple in structure, with a single primary root that grows vertically ... in Arabidopsis thaliana journal Mol. Plant Microbe Interact. volume 20 issue 2 pages 207 17 year 2007 pmid 17313171 doi 10.1094 MPMI 20 2 0207 ref Arabidopsis can complete its entire life cycle in six ... self pollinate. In the lab, arabidopsis may be grown in Petri plates or pots, under fluorescent ... more details
The Arabidopsis thaliana Arabidopsis Biological Resource Center ABRC was established at The Ohio State University in September, 1991. Primary support for the ABRC is provided by a National Science Foundation grant. The mission of the ABRC is to acquire, preserve and distribute seed and DNA resources that are useful to the Arabidopsis research community. New seed and DNA enter ABRC through donation by national and international researchers. An identifying number is assigned to each stock. The stock is then evaluated, documented and made available for distribution. The preservation of seed and DNA stocks is conducted according to strict, defined protocols. Backups of stocks are maintained to ensure preservation. The ABRC s holdings and stock distribution rates have increased rapidly so that presently hundreds of thousands of stocks are available. More than 100,000 stocks are shipped annually to researchers in more than 60 countries, and modest fees for stocks are charged. The ABRC database functions and ordering system are incorporated into The Arabidopsis Information Resource , TAIR . Researchers can obtain information about Arabidopsis, perform stock searches, order stocks, and view current and past orders. They welcome new seed and DNA stock donations at any time. See also Arabidopsis thaliana Nottingham Arabidopsis Stock Centre References ref http abrc.osu.edu ref references Category 1991 establishments Category Brassicaceae Category Agriculture in the United States Category Scientific organizations based in the United States ... more details
infobox software name Nottingham Arabidopsis Stock Centre logo Image NASC logo.png website http www.arabidopsis.info The Nottingham Arabidopsis Stock Centre NASC provides seed and information resources to the International Arabidopsis Genome Project and the wider research community. It is based in the School of Biosciences at the University of Nottingham s Sutton Bonington Campus , in the English county of Nottinghamshire . It holds more than 300,000 different stocks of seed representing over half a million genotypes and provides a Bioinformatics and Genechip service. It is one of only two Arabidopsis thaliana stock centres worldwide. Whenever a new mutant or lineage evolution line of Arabidopsis thaliana is created, scientists donate samples to NASC where they are maintained and thus are made available to scientists worldwide. It was established in April 1991 as part of the Plant Molecular Biology initiative of the Agricultural and Food Research Council AFRC . The Centre is funded by the Biotechnology and Biological Sciences Research Council BBSRC . The Stock Centre was founded by Dr Bernard Mulligan Directed from 1991 to 1999 by Dr Mary Anderson and from 1999 present by Prof. Sean May. NASC s activities are coordinated with those of the Arabidopsis Biological Resource Center, ABRC based at Ohio State University , USA and managed by Dr. Randy Scholl retiring in 2009 . This facilitates a unified and efficient service for the research community. The stock centres have a distribution agreement. NASC distributes to Europe and ABRC distributes to the Americas . Laboratories in other locations may establish their primary affiliation with either centre. External links http arabidopsis.info NASC arabidopsis.info http arabidopsis.info wiki index.php Main Page WeedsWorldWiki Agriculture in the United Kingdom Category 1991 establishments in England Category Brassicaceae Category Agriculture in the United Kingdom Category Agriculture in England Category University of Nottingham ... more details
identification, GAI , also known as GA INSENSITIVE , is an http species.wikimedia.org wiki Arabidopsis thaliana Arabidopsis thaliana gene . ref name entrez cite web title Entrez Gene GAI url http www.ncbi.nlm.nih.gov ... L, et al. title Reduced gibberellin response affects ethylene biosynthesis and responsiveness in the Arabidopsis ... and RGA promoters in Arabidopsis seeds. journal Plant Cell. volume 19 issue 4 pages 1192 1208 ... The Arabidopsis F box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin ... 10.1105 tpc.020958 pmc 490034 cite journal author Fu X, et al. title The Arabidopsis mutant sleepy1gar2 ... to light and gibberellin independent seed germination in Arabidopsis. journal Planta. volume 223 issue ... DEFAULTSORT Gai Arabidopsis Thaliana Gene Category Transcription factors Category Signal transduction ... more details
ABRC may refer to Arabidopsis Biological Resource Center , the American collection and distribution organization for the Arabidopsis plant. Located at The Ohio State University. Ada Byron Research Center , a research center associated with the Donald Bren School of Information and Computer Sciences , University of California, Irvine Disambiguation DEFAULTSORT Abrc ... more details
Rockcress is a common name used for three similar genus genera of flowering plant s in the family Brassicaceae Arabis Arabidopsis Boechera Category Brassicaceae disambig ... more details
Tair is derived from altair , the Arabic word for a bird. Tair Airways Tair Carn Uchaf Tair lens , a Soviet telephoto prime lens series manufactured by Zenit camera Zenit . TAIR may refer to The Arabidopsis Information Resource , a database on Arabidopsis thaliana genome Tairov may refer to Alexander Tairov 1885 1950 , a Russia theatre director Tairov , a village in the Armavir Province of Armenia See also Tahir disambig ru ... more details
Orphan date January 2011 infobox biodatabase title ArtadeDB logo File Database.png description ARabidopsis Tiling Array based Detection of Exons scope organism Arabidopsis Thaliana center laboratory Phenome Informatics Team, Functional Genomics Research Group, Genomic Sciences Center, Japan. author Tetsuro Toyoda pmid Toyoda & al. 2005 ref name pmid16098113 released standard format url http omicspace.riken.jp ARTADE download webservice sql sparql webapp standalone license versioning frequency curation bookmark version ARTADE ARabidopsis Tiling Array based Detection of Exons is a database for the annotation of genome wide DNA microarray tiling array data in Arabidopsis thaliana Arabidopsis ref name pmid16098113 cite journal quotes yes last Toyoda first Tetsuro authorlink coauthors Shinozaki Kazuo year 2005 month Aug title Tiling array driven elucidation of transcriptional structures based on maximum likelihood and Markov models journal Plant J. volume 43 issue 4 pages 611 21 publisher location England issn 0960 7412 pmid 16098113 doi 10.1111 j.1365 313X.2005.02470.x bibcode oclc id url language eng format accessdate laysummary laysource laydate quote ref See also DNA microarray References references External links http omicspace.riken.jp ARTADE Category Biological databases Category Gene expression Category Microarrays Biodatabase stub ... more details
AGAMOUS AG is a gene and transcription factor for Arabidopsis thaliana . The TAIR ATG number is AT4G18960. Regulome activates SPL, GA4, AP3 inhibits AP1 activated by WUS, LFY inhibited by References cite journal author Bowman JL, Smyth DR, Meyerowitz EM title Genetic interactions among floral homeotic genes of Arabidopsis journal Development volume 112 issue 1 pages 1 20 year 1991 month May pmid 1685111 doi url http dev.biologists.org cgi pmidlookup?view long&pmid 1685111 cite journal author Bowman JL, Drews GN, Meyerowitz EM title Expression of the Arabidopsis floral homeotic gene AGAMOUS is restricted to specific cell types late in flower development journal Plant Cell volume 3 issue 8 pages 749 58 year 1991 month August pmid 1726485 pmc 160042 doi 10.1105 tpc.3.8.749 url cite journal author Drews GN, Bowman JL, Meyerowitz EM title Negative regulation of the Arabidopsis homeotic gene AGAMOUS by the APETALA2 product journal Cell volume 65 issue 6 pages 991 1002 year 1991 month June pmid 1675158 doi 10.1016 0092 8674 91 90551 9 url http linkinghub.elsevier.com retrieve pii 0092 8674 91 90551 9 cite journal author Yanofsky MF, Ma H, Bowman JL, Drews GN, Feldmann KA, Meyerowitz EM title The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors journal Nature volume 346 issue 6279 pages 35 9 year 1990 month July pmid 1973265 doi 10.1038 346035a0 url External links http atensembl.arabidopsis.info Arabidopsis thaliana TAIR geneview?db core gene AT4G18960 TAIR G Agamous gene information on AtEnsembl Category Transcription factors ... more details
burning for Arabidopsis during the dark ages. ref name pennisi Dr. R dei conducted his research ... author George Redei.html Books by R dei http www.arabidopsis.org The Arabidopsis Information ... more details
The acronym NASC can refer to National Association of State Auditors, Comptrollers and Treasurers National Association of State Comptrollers National Association of Student Councils , a U.S. student organization National Space Council National Aeronautics and Space Council Naval Air Systems Command NAVAIR , the command of the United States Navy which provides material support for naval aircraft and airborne weapons systems Necessary and sufficient condition , in logic and mathematics New Age Standard Comic , the subtitle of Monthly Dragon Age. North American Solar Challenge , a solar car race in the United States and Canada North American Spondylitis Consortium , a genetic project funded through the University of Texas Health Science Centre, Houston North Augusta, South Carolina Nottingham Arabidopsis Stock Centre , the European collection and distribution centre for the model plant Arabidopsis disambig ... more details
HOTHEAD is a gene in Arabidopsis thaliana that encodes an flavin adenine dinucleotide containing oxidoreductase . It is involved in the creation of the carpel during the morphogenesis formation of flowers , through the fusion of Epidermis botany epidermal cells. ref cite journal author Krolikowski KA, Victor JL, Wagler TN, Lolle SJ, Pruitt RE title Isolation and characterization of the Arabidopsis organ fusion gene HOTHEAD journal Plant J. volume 35 issue 4 pages 501 11 year 2003 month August pmid 12904212 ref In 2005 mutant plants lacking HOTHEAD were proposed to be able to remember the sequences of genes that were present in their ancestors, through some kind of non Mendelian mechanism of inheritance. ref cite journal author Lolle SJ, Victor JL, Young JM, Pruitt RE title Genome wide non mendelian inheritance of extra genomic information in Arabidopsis journal Nature volume 434 issue 7032 pages 505 9 year 2005 month March pmid 15785770 doi 10.1038 nature03380 ref Later research showed that this strange phenotype was due to the plants having a pronounced bias towards outcrossing , rather than the usual behavior of Arabidopsis , which is to self fertilise. ref cite journal author Peng P, Chan SW, Shah GA, Jacobsen SE title Plant genetics increased outcrossing in hothead mutants journal Nature volume 443 issue 7110 pages E8 discussion E8 9 year 2006 month September pmid 17006468 doi 10.1038 nature05251 ref ref cite journal author Mercier R, Jolivet S, Vignard J, et al. title Outcrossing as an explanation of the apparent unconventional genetic behavior of Arabidopsis thaliana hth mutants journal Genetics volume 180 issue 4 pages 2295 7 year 2008 month December pmid 18845842 pmc 2600959 doi 10.1534 genetics.108.095208 ref References reflist Category Botany Category Developmental genes and proteins ... more details
Multiple issues wikify March 2012 notability September 2011 orphan April 2011 infobox biodatabase title mirEX logo File Database.png description pre miRNA Gene Expression Atlas. scope organism Arabidopsis thaliana center Institute of Molecular Biology and Biotechnology laboratory Laboratory of Computational Genomics author Soon pmid released Soon standard format url http www.comgen.pl mirex download webservice sql sparql webapp standalone license versioning frequency curation bookmark version 1.0 mirEX is a comprehensive platform for comparative analysis of microRNA precursors expression data. Gene expression profiles are stored in universal and expandable database scheme and wrapped by intuitive user friendly interface. mirEX interface allows simultaneous comparison of expression levels between various microRNA genes in diverse organs and developmental stages. At present, miREX integrates information about the expression profile of 190 Arabidopsis thaliana pri miRNAs in seven different developmental stages seeds, seedlings and various organs of mature plants. References See http en.wikipedia.org wiki Wikipedia Footnotes on how to create references using ref ref tags which will then appear here automatically Reflist External links http www.comgen.pl mirex mirEX Arabidopsis pri miRNA Expression Atlas Categories Category Articles created via the Article Wizard Category Science software Category Biological databases ... more details
Infobox rfam Name mir 395 microRNA precursor family image RF00451.jpg width caption Predicted secondary structure and sequence conservation of mir 395 Symbol mir 395 AltSymbols Rfam RF00451 miRBase MI0001007 miRBase family MIPF0000016 RNA type Gene MicroRNA miRNA Tax domain Eukaryota GO GO 0035195 GO 0035068 SO SO 0001244 CAS number EntrezGene HGNCid OMIM PDB RefSeq Chromosome Arm Band LocusSupplementaryData mir 395 is a non coding RNA called a microRNA that was identified in both Arabidopsis thaliana and Oryza sativa computationally and was later experimentally verified. mir 395 is thought to target mRNA s coding for ATP sulphurylase s. ref cite journal last Jones Rhoades first MW coauthors Bartel DP year 2004 title Computational Identification of Plant MicroRNAs and Their Targets, Including a Stress Induced miRNA journal Mol Cell volume 14 pages 787&ndash 799 pmid 15200956 doi 10.1016 j.molcel.2004.05.027 issue 6 ref The mature sequence is excised from the 3 arm of the Stem loop hairpin . miR 395 is upregulated in Arabidopsis during sulphate limited conditions, when the mature miRNA then regulates sulphur transporters and ATP sulphurylases. ref cite journal last Liang first G coauthors Yang, F, Yu, D title MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana. journal The Plant journal for cell and molecular biology date 2010 Jun 1 volume 62 issue 6 pages 1046 57 pmid 20374528 ref ref cite journal last Liang first G coauthors Yu, D title Reciprocal regulation among miR395, APS and SULTR2 1 in Arabidopsis thaliana. journal Plant signaling & behavior date 2010 Oct volume 5 issue 10 pages 1257 9 pmid 20935495 ref References reflist 1 External links Rfam id RF00451 name mir 395 microRNA precursor family http microrna.sanger.ac.uk cgi bin sequences mirna summary.pl?fam MIPF0000016 miRBase family entry for mir 395 Category microRNA miRNA precursor families molecular cell biology stub ... more details
wiktionary hothead Hothead may refer to Hothead Courage the Cowardly Dog Hothead Courage the Cowardly Dog , a 1999 television episode Hothead film Hothead film , a 1979 French film HOTHEAD gene , a gene in Arabidopsis thaliana that encodes a flavin adenine dinucleotide containing oxidoreductase Hothead Smallville episode Hothead Smallville episode , a 2001 television episode Hothead Games , an independent video game developer Hothead Paisan , a fictional character See also Hotheadedness disambig ... more details
Orphan date February 2009 The Plant Proteome Database is an National Science Foundation funded project to determine the biological function of each protein in plant s ref Sun Q, Zybailov B, Majeran W, Friso G, Olinares PD, van Wijk KJ. 2008 PPDB, the Plant Proteomics Database at Cornell. Nucleic Acids Res. 2 Oct ref . It includes data for two plants that are widely studied in molecular biology , Arabidopsis thaliana and maize Zea mays . Initially the project was limited to plant plastids, under the name of the Plastid PDB, but was expanded and renamed Plant PDB in November 2007 ref PPDB Home Page http ppdb.tc.cornell.edu ref . See also Proteome References Reflist External links http ppdb.tc.cornell.edu Plant Proteome Database home page http www.arabidopsis.org TAIR The Arabidopsis Information Resource http groups.yahoo.com group Plastids Plastid Mailing List Category Plant physiology Category Government databases in the United States Category Biological databases ... more details
Polyuridylation , also called oligouridylation , is the addition of several uridine nucleotides to the directionality molecular biology 3 end of an RNA . One group of RNAs that can be polyuridylated are histone mRNAs that lack a poly A tail . Polyuridylation of a histone mRNA promotes its degradation, involving the exosome complex exosome . Other RNAs in Arabidopsis thaliana Arabidopsis and Mus musculus mouse have been seen to be polyuridinylated after cleavage. ref name Wilusz cite journal author Wilusz CJ, Wilusz J title New ways to meet your 3 end oligouridylation as a step on the path to destruction journal Genes Dev. volume 22 issue 1 pages 1 7 year 2008 pmid 18172159 pmc 2731568 doi 10.1101 gad.1634508 url http genesdev.cshlp.org content 22 1 1.long ref References reflist Category RNA Post transcriptional modification molecular biology stub ... more details
the model organism model plant organism Arabidopsis thaliana . ref http www.bio pro.de standort 03483 ... in the genetic dissection of plant embryogenesis . Using the genetically tractable plant Arabidopsis ..., T., MisCra, S. and J rgens, G. 1991. Mutations affecting body organization in the Arabidopsis ... plate in plant cells. ref Lukowitz, W., Mayer, U., J rgens, G. 1996 . Cytokinesis in the Arabidopsis ... . The Arabidopsis KNOLLE protein is a cytokinesis specific syntaxin. J. Cell Biol. 139, 1485 1493. ref ..., P., Delbarre, A., Ueda, T., Nakano, A., J rgens, G. 2003 . The Arabidopsis GNOM ARF GEF mediates ..., G. 2008 . Membrane association of the Arabidopsis ARF exchange factor GNOM involves interaction ..., G. 1991. Mutations affecting body organization in the Arabidopsis thaliana embryo. Nature ... more details
Orphan date March 2011 Superman is a plant gene in Arabidopsis thaliana , that plays a role in controlling the boundary between stamen and carpel development in a flower. ref cite web date 2006 02 01 url http www.arabidopsis.org servlets TairObject?id 26981&type gene title Gene Model SUP work The Arabidopsis Information Resource TAIR accessdate 2007 01 23 ref It is named for the comic book character Superman , and the related genes kryptonite gene and clark kent were named accordingly although the latter turns out to just be another form of superman . ref cite web date 2005 12 03 url http tinman.vetmed.helsinki.fi eng arabidopsis.html title Clever Arabidopsis gene names work Clever gene names publisher Mikael Niku and Mikko Taipale accessdate 2007 01 23 ref It encodes a transcription factor specifically a C2H2 type zinc finger protein . ref cite journal url http pcp.oxfordjournals.org cgi content abstract 43 1 52 title Ectopic Expression of SUPERMAN Suppresses Development of Petals and Stamens author Jae Young Yun, Detlef Weigel and Ilha Lee journal Plant and Cell Physiology year 2002 volume 43 issue 1 pages 52 57 doi 10.1093 pcp pcf018 pmid 11828022 ref Homology biology Homologous genes are known in the petunia ref name nakagawa cite journal journal Plant Cell year 2004 month April volume 16 issue 4 pages 920 932 doi 10.1105 tpc.018838 title The Petunia Ortholog of Arabidopsis SUPERMAN Plays a Distinct Role in Floral Organ Morphogenesis author Hitoshi Nakagawa, Silvia Ferrario, Gerco C. Angenent, Akira Kobayashi, and Hiroshi Takatsuji pmid 15020746 pmc 412866 ref and snapdragon , ref http www.nature.com nrg journal v4 n8 box nrg1127 BX3.html Box 3 The control of floral determinacy in Antirrhinum and Arabidopsis from cite journal title An everlasting pioneer the story of Antirrhinum research author Zsuzsanna Schwarz Sommer, Brendan Davies & Andrew Hudson journal Nature ... differences from the functioning in Arabidopsis . Superman is expressed early on in flower development ... more details
wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle ... editing in mitochondria of Arabidopsis Thaliana journal J Biol Chem volume 285 issue 35 pages 27122 ... more details
Taxobox color lightgrey image image width 240px image caption regnum Bacterium Bacteria phylum Proteobacteria classis Gamma Proteobacteria ordo Pseudomonadales familia Pseudomonadaceae genus Pseudomonas species P. thivervalensis binomial Pseudomonas thivervalensis binomial authority Achouak, et al. 2000 type strain http www.angers.inra.fr cfbp resultsuite.php?r0 5754&r1 Pseudomonas 20thivervalensis&r2 Pseudomonas&r3 thivervalensis&r4 &r5 &r6 Souche 20type&r7 DSM 2013194&r8 Gardan 20L. 2011261&r9 Degraeve 20S. 20SBK26&r10 Arabidopsis 20thaliana&r11 &r12 &r13 France&r14 Nancy&r15 &r16 2001&r17 &r18 &r19 &r20 &r21 Achouak 20et 20al. 202000, 20sp. 20nov. CFBP 5754 br http www.dsmz.de microorganisms html strains strain.dsm013194.html DSM 13194 br http www.jcm.riken.jp cgi bin jcm jcm number?JCM 11941 JCM 11941 Pseudomonas thivervalensis is a Gram negative soil bacterium that infects the root s of Arabidopsis thaliana ref cite journal author Achouak, et al. title Pseudomonas brassicacearum sp. nov. and Pseudomonas thivervalensis sp. nov., two root associated bacteria isolated from Brassica napus and Arabidopsis thaliana journal Int J Syst Evol Microbiol volume 50 pages 9 18 year 2000 Jan pmid 10826782 last2 Sutra first2 L last3 Heulin first3 T last4 Meyer first4 JM last5 Fromin first5 N last6 Degraeve first6 S last7 Christen first7 R last8 Gardan first8 L issue 1 ref . Based on 16S rRNA analysis, P. thivervalensis falls within the Pseudomonas fluorescens P. fluorescens group ref name Ibid Ibid. ref . It derives its name from the fact that it was first isolated in Thiverval, France ref name Ibid . References Reflist Category Pseudomonadales Proteobacteria stub ... more details
Trans acting siRNA abbreviated ta siRNA or sometimes tasiRNA is a form of small interfering RNA siRNA that represses gene expression through post transcriptional gene silencing in land plant s. ref name Vazquez2004 cite journal author Vazquez F, Vaucheret H, Rajagopalan R, Lepers C, Gasciolli V, Mallory AC, Hilbert JL, Bartel DP, Cr t P title Endogenous trans acting siRNAs regulate the accumulation of Arabidopsis mRNAs journal Molecular Cell volume 16 issue 1 pages 69 79 year 2004 month October pmid 15469823 doi 10.1016 j.molcel.2004.09.028 ref ref cite journal author Peragine A, Yoshikawa M, Wu G, Albrecht HL, Poethig RS title SGS3 and SGS2 SDE1 RDR6 are required for juvenile development and the production of trans acting siRNAs in Arabidopsis journal Genes Dev. volume 18 issue 19 pages 2368 79 year 2004 month October pmid 15466488 pmc 522987 doi 10.1101 gad.1231804 ref ref cite journal author Axtell MJ, Jan C, Rajagopalan R, Bartel DP title A two hit trigger for siRNA biogenesis in plants journal Cell volume 127 issue 3 pages 565 77 year 2006 month November pmid 17081978 doi 10.1016 j.cell.2006.09.032 ref It is transcribed from the genome to form a polyadenylated, double stranded precursor. ref name Vazquez2004 Unlike other siRNAs, but like microRNA , ta siRNA does not require full complementarity to its target RNA to have an effect. ref cite journal author Yoshikawa M, Peragine A, Park MY, Poethig RS title A pathway for the biogenesis of trans acting siRNAs in Arabidopsis journal Genes Dev. volume 19 issue 18 pages 2164 75 year 2005 month September pmid 16131612 pmc 1221887 doi 10.1101 gad.1352605 ref References Reflist natural antisense transcripts Nucleic acids molecular biology stub Category RNA interference ... more details
Stp4 sugar transporter protein 4 is a gene from the model plant, Arabidopsis thaliana . ref name pmid8989877 cite journal author Truernit E, Schmid J, Epple P, Illig J, Sauer N title The sink specific and stress regulated Arabidopsis STP4 gene enhanced expression of a gene encoding a monosaccharide transporter by wounding, elicitors, and pathogen challenge journal Plant Cell volume 8 issue 12 pages 2169 82 year 1996 month December pmid 8989877 pmc 161343 doi 10.1105 tpc.8.12.2169 url ref The gene transcribes for an integral membrane protein that is situated in the plasma membrane of sink tissues such as roots, anthers and vascular tissue ref name pmid8989877 ref ref name pmid12805612 cite journal author Fotopoulos V, Gilbert MJ, Pittman JK, Marvier AC, Buchanan AJ, Sauer N, Hall JL, Williams LE title The monosaccharide transporter gene, AtSTP4, and the cell wall invertase, Atbetafruct1, are induced in Arabidopsis during infection with the fungal biotroph Erysiphe cichoracearum journal Plant Physiology volume 132 issue 2 pages 821 9 year 2003 month June pmid 12805612 pmc 167022 doi 10.1104 pp.103.021428 url ref . The protein s function is to transport monosaccharide sugars in to these sink tissues. The protein is classed as a symporter since sodium ions are also transported concurrently in the same direction. Of special interest to plant scientists is the finding that the transcription of this gene is responsive to environmental stress, more specifically wounding ref name pmid8989877 ref and pathogen infection by the fungal biotroph Erysiphe cichoracearum ref name pmid12805612 ref . See also Sodium glucose transport proteins Glucose transporter References Reflist External links http www.arabidopsis.org servlets TairObject?id 38767&type locus TAIR http www.uniprot.org uniprot Q39228 UniProt Category Genes genetics stub ... more details
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