Chaga s cardiomyopathy By extended haplotype DR7 DQA1 0201 DQB1 0202 is associated with Graves disease ... V, Hirankarn N title The association between HLA class II haplotype with Graves disease in Thai ... interesting genetics with DR7. The A29 Cw16 B44 DR7 DQ2 haplotype is in strong linkage disequilibrium ... as far north as Ireland . The A33 Cw7 B44 DR7 offers the same scenario. This haplotype is found ... are the likely source, confirmed by the fact the haplotype is found in Pakistan , China and India . There is the possibility that this haplotype is a recent Holocene arrival from Africa or the Middle East to Central Asia as this best explains the alleles within the haplotype. The A19 A29, A30, A31, A32 ... more details
inhabitants in Cameroon identification of A 2612 B 4407 haplotype journal Tissue Antigens volume ... Cw 0802 B 1402 haplotype which can be extended to DRB1 and DQB1 in certain instances See Below . The source ... Arabia Oman, UAE and then markedly rise in the Brahui and Balochi of Pakistan. One haplotype stands out, the A33 B58 DR3 DQ2 haplotype which is found in West Africa, in Sudan, and Pakistan, scattered ... 0802 otherwise seen with this haplotype ref ref name isbn0 19 262390 7 align left Portuguese ... is random, then one can estimate the time of equilibration based on the size of the haplotype, the A B DR haplotype is over 2 million nucleotides in length. Given this length it is unlikely it spread ... . Its presence in India , particularly northern India, indicates possible spread of this haplotype ... align left Vietnamese 2.7 This haplotype appears to precede A33 B58 in Asia, bringing with it the DR7 DQ2 haplotype. There are two versions of the haplotype, possibly of different origins, its a good reason why serotyping alone should not be relied upon. The first haplotype is A33 Cw14 B44 DR13 DQ6.4 ... font DQB1 font color DarkGreen 0604 font DPB1 font color Purple 0401 font This haplotype is found ... the level of disequilibrium of the Super B8 haplotype, the level of disequilibrium is high, indicating ... DQB1 font color DarkGreen 0202 font The second haplotype, like A33 B58 is found in Korea but not in Japan. ref name pmid15853898 This haplotype carries the other common DQ2 haplotype, DQ2.2. The Cw 0701 is found in the A 33 B58 haplotype and is like the result of a recombination betwee A33 Cw7 and a different B44 DR7 haplotype. These haplotypes indicate that interpreting population relationships by allele or even by low resolution haplotype information is error prone and suggests the need for high resolution multigene haplotype studies. A33 Cw3 B58 DR3 DQ2 border 0 cellspacing 0 cellpadding ... B 5802 ref 1.1 Within eastern Asia A 3303 is in linkage dissiquilbrium with on haplotype in particular ... more details
6p21.31 6p21.31 HLA DQ1 is a serotype that covers a broad range of HLA DQ haplotype s. Historically ... DQB1 0501 haplotype which is part of a braoder DR1 DQ1 haplotype. DQA1 0102 DQA1 0102 is associated ... haplotype in Eurasia, with higher frequency in central Asia relative to elsewhere. It is part of a European ancestral haplotype B7 DR15 DQ1 that appears to have expanded asymmetrically into Europe. The A3 B7 DR15 DQ1 haplotype indicates relationships in Eurasia that span from Korea to Ireland ... disease, this association is apparent in Japanese studies in the 0103 DQB1 0601 haplotype, and in Europe with the 0103 DQB1 0603 haplotype, indicating the protective effect is influenced by the alpha ... HLA DQA1 0103 DQB1 0601 haplotype and Helicobacter pylori positive gastric mucosa associated lymphoid ... haplotype sharing, CD4 decline and AIDS in hemophilic siblings. Multicenter Hemophilia Cohort and Hemophilia ... 7755916 doi 10.1097 00002030 199509030 00009 ref DQA1 0103 DQB1 0601 is part of a multigene haplotype ... volume 7 issue pages 73 80 year 1992 pmid 1360976 doi 10.1007 BF01744548 ref Another haplotype, DR8 DQ1 which contains this haplotype may be associated with primary biliary cirrhosis , ref name pmid7699227 ... pmid 7704083 doi ref There is a negative association of this DR15 DQ1 haplotype in Japanese with inflammatory ... 0039.1999.530405.x ref DQA1 0103 DQB1 0603 is part of a DR DQ haplotype DR13 DQ1 that increases for primary ... R. last9 Ercilla first9 G. ref The same haplotype shows a negative association with rheumatic heart ... of a multigene haplotype DR14 DQ5 that is associated with MuSK positive Myasthenia gravis. References ... more details
EBI br clear left Alleles It was reported that a novel haplotype was found in Italian bone marrow doners. A2 CW 1601 B45 DRB1 1101 DRB3 0301 DQA1 0102 DQB1 0502. This haplotype indicates possible ... L, Ghidini G, Ambroselli F, Gatti C, Martinetti M title A novel Italian haplotype predominates ... more details
Kogan lang ru is a popular Russian version of Jew ish surname Cohen surname Cohen , which denotes the descendants of the Kohanim high priests of ancient Israel Artur Kogan b. 1974 , Israeli chess master Belle Kogan 1902 2000 , American industrial designer Boris Kogan 1940 1993 , Russian American chess master Herman Kogan 1914 1989 , American journalist Jacob Kogan b. 1995 , young American actor Leonid Borisovitch Kogan Leonid Kogan 1924 1982 , Russian violinist Michael Kogan 1917 1984 , Russian Jewish businessman Nina Kogan 1889 1942 , Russian avant garde painter Pavel Kogan poet 1918 1942 , Soviet poet Ruslan Kogan b. 1982 , founder and director of Kogan Technologies Yitzchok Kogan , Orthodox rabbi Yosif Arkadyevich Kogan , birth name of Osip Yermansky 1867 1941 , Russian Menshevik economist Kogan may also refer to Kogan Technologies , Consumer Electronics brand Kogan Agora , mobile phone developed by the Australian company Kogan Technologie that runs the Android mobile phone platform See also Kohanim Cohen as a surname Versions of the surname Cohen Cohen Modal Haplotype The Cohen Gene Kagan Kaganovich Cohn Eugen Kogon 1903 1987 , German historian and holocaust survivor surname Category Kohenitic surnames fr Kogan ru uk ... more details
genetic genealogy This is a list of genetic genealogy topics . Important concepts Genetic genealogy Genealogical DNA test Human mitochondrial DNA haplogroups Human Y chromosome DNA haplogroups Allele Allele frequency Electropherogram Genetic recombination Haplogroup Haplotype haplogroup Most recent common ancestor Short tandem repeat STR Single nucleotide polymorphism SNP Y STR Y chromosome short tandem repeat Related fields Archaeogenetics Genealogy Genetics Genetic fingerprinting DNA sequencing Population genetics Molecular genetics Patrilineal relationships Patrilineality XY sex determination system Y chromosomal Adam Y chromosomal Aaron Adam s Curse Paternal mtDNA transmission RecLOH Matrilineal relationships Matrilineality Mitochondrion Mitochondrial DNA Human mitochondrial genetics Mitochondrial Eve X chromosome Biogeography, ethnicity and migration Human migration Population genetics Multiregional hypothesis Single origin hypothesis Projects Human Genome Project International HapMap Project Molecular Genealogy Research Project Surname DNA project The Genographic Project Lists List of Y STR public databases List of Y chromosome databases List of DNA tested mummies List of DNA tested historical figures List of genetic results derived from historical figures Y chromosome haplogroups by populations See also List of genetics related topics human genetics Category Genetic genealogy Category Biology lists Genetic genealogy Category Outlines Genetic genealogy topics Category Outlines ... more details
than elsewhere, it is part of a long haplotype that appears to have been frequent in the ancient peoples of Northwestern Europe. A1 is a frequent component of the HLA A1 B8 DR3 DQ2 AH8.1 haplotype ... immune system involvement. Because of its linkage within the AH8.1 haplotype many studies showed ... with infection rates in HIV remain associated within the A1 region of the haplotype. Serotype Serotype ... gene alleles in the vicinity of the A1 gene on the larger haplotype. A1 and autoimmune diseases A1 ... drifted toward the class II region. further2 HLA A1 B8 haplotype A1 B8 and autoimmune diseases Autoimmune disease in HLA A1 B8 haplotype A1 B58 haplotype A1 B17 where B58 is dominant may remain associated ... on the HLA A1 B8 DR3 DQ2 haplotype, the association appears not to extend beyond the HLA B locus ... in allergic disease, these are found to link to extended HLA A1 B8 region. further2 HLA A1 B8 haplotype A1 B8 and allergic disease Allergies in HLA A1 B8 haplotype Oddly, A1 was also found associated ... 218441 doi url ref Some diseases found associated with A1 actually link to the extended A1 B8 haplotype, viral induced hepatitis and accelerated progression of HIV are examples. further2 HLA A1 B8 haplotype A1 B8 and infectious disease Infectious disease and A1 B8 haplotype A1 with B8 showed an increase ... haplotype has a known association with Enteropathy associated T cell lymphoma , approximately 70 of patients ... HLA A1 B8 haplotype A1 B8 Western Irish, N. Irish, Scottish, Wales, NW England, Scandinavia, Yugoslavia ... more details
Taxobox name Sicilian Green Toad image Bufo siculus Mario Lo Valvo.jpg 250px regnum Animal ia phylum Chordate Chordata classis Amphibia ordo Anura familia Bufonidae genus Bufo species B. siculus binomial Bufo siculus binomial authority St ck et al., 2008 The Sicilian Green Toad lang it il rospo smeraldino siciliano is a Bufo green toad found only in Sicily . This toad previously attributed to the European Green Toad Bufo viridis is now recognized as a separate species Bufo siculus . Recent studies on the Mediterranean populations of Bufo spp. demonstrated that this Sicilian taxon has a distinct Mitochondrial DNA mitochondrial haplotype differing in this respect from all other circum Mediterranean green toad species. It is instead closely related to Bufo boulengeri a North African species of Bufo , from which it separated two million years ago between the Middle Pliocene and the Pleistocene . External links http amphibiaweb.org cgi amphib query?where genus Bufo&where species siculus AmphibiaWeb Category Bufo Category Reptiles of Italy Category Fauna of Italy Category Animals described in 2008 Category Endemic fauna of Italy fr Pseudepidalea sicula it Bufo siculus ml ... more details
Mgh haplotype HLA DR3 DQ2 image HLA mini.png image source HLA region on chromosome 6 chromosome 6 location ... DQ haplotype. Certain HLA DR and DQ genes have known involvement in autoimmune diseases. HLA DR3 DR3 HLA DQ2 DQ2 , a multigene haplotype, stands out in prominence because it is a factor in several prominent diseases, namely coeliac disease and juvenile diabetes . In coeliac disease, the DR3 DQ2 haplotype ... in homozygotes and linear increases in haplotype resulting in several fold increases of disease ... . HLA DR3 DQ2 is found in HLA A1 B8 DR3 DQ2 haplotype in Northern Europeans including the British ... HLA DQA1 DQA1 HLA DQB1 DQB1 cis chromosomal haplotype on human chromosome 6 6p 21.3 in a region known as the Human leukocyte antigen HLA complex. The DR3 DQ2 haplotype is notable because of the very strong ... complex in northern and northwestern Europe. The linked haplotype is HLA A1 B8 DR3 DQ2 AH8.1 in the most recent literature Because of its strong linkage disequilbrium, each of the genes in the haplotype ... 0202 is not genetically linked to DQA1 0501 and its cis haplotype isoform infrequently mediates ..., Alvarez M, Diaz Campos N, Varela P, Gomez Casado E, Martinez Laso J title HLA allele and haplotype ... M title HLA class II allele and haplotype frequencies in Ethiopian Amhara and Oromo populations ... DQ2 probably originated from Central or West Africa. DQ2.5cis haplotype is the second highest frequency haplotype in the Aka N. Congo and several other surrounding groups it is virtually absent in the Kung .... DQ2.5 appears to be derived from DQ2.2 by gene recombination. One haplotype DQA1 0501 DQB1 0202 can ... M, Thompson J, McNamara S, Street J, Thomas M title HLA class I A, B and II DR, DQ gene and haplotype ... R, Schreuder G, D Amaro J, Oudshoorn M title HLA gene and haplotype frequencies in Dutch blood ... Zucman S title HLA class II allele and haplotype distribution in a population from central Poland ... R, Doxiadis I, Stavropoulos Giokas C title MHC class I and class II phenotype, gene, and haplotype ... more details
ref This allele group is most commonly found in West Africa, but A single Haplotype of Cw16 is found ... seen an expansion and it is a region in which most of the haplotype diversity is seen. As the frequency ... , however given very little haplotype diversification See A29 Cw 16 B44 haplotype, this page indicates ... HLA Cw 16 haplotype frequencies style background efe5ef freq style background eee5ef ref. align left ... Spain into the British Ilses, some flow up the channel but haplotype frequency drops in the interior of Europe. This haplotype can generally be extended from A to DQ as HLA A29 A29 Cw16 HLA B44 B44 ... time for equilibration, supporting its recent introduction into Europe. This particular haplotype ... more details
cis cis wikt haplotypehaplotype isoforms. These isoforms, nicknamed DQ4.3 and DQ4.4, are also ... pmid 16157380 doi 10.1016 j.ophtha.2005.05.016 ref The DR8 DQ4 haplotype is associated with Thyroid ... of HLA DQ4 DR8 haplotype with papillary thyroid carcinomas. journal Clin Endocrinol Oxf volume 64 issue ... JIA is primarily associated with HLA DR8 but not DQ4 on the DR8 DQ4 haplotype. journal Ann Rheum Dis ... HLA DRB10405 DQB10401 haplotype is associated with autoimmune pancreatitis in the Japanese population .... The DQA1 0303 DQB1 04 haplotype is associated with Crohn s disease ref cite journal author Matake H ... 80 Serotype width 80 haplotype width 45 style background e7f7f7 font color green B1 font width 45 ... to haplotype frequencies for sake of consistency DR DQ types. This table is presented here because ... is with the DQA1 0401 DQB1 0402 DQ4.24 for this page haplotype in Northwestern Mexico and the highland region of western South America reaching 40 haplotype frequencies in that area. Outside of the Indigenous ... in the Mansi at 4 and punctate levels in between. Haplotype diversity of DQB1 0402 appears to be centered ... frequency in the Zoroastrians of Yadz region DQA1 0401 and DQB1 0402 . Thus the DR8 DQ4.24 haplotype ... types and there is some haplotype diversity. So that it appears the presence of the DQA1 03 ... more details
01 DRB1 0402 DQA1 0301 DQB1 0302 haplotype, also called DR4 DQ8 and also the DQA1 0303 DQB1 0301 haplotype ... studies were conducted only DR4 0402 HLA DQ8 DQ8 was found, indicating that the entire haplotype ... New HLA haplotype frequency reference standards high resolution and large sample typing of HLA ... with these antibodies and the common haplotype association is the HLA DR53 serotype. References ... more details
A2 Cw11 1 B46 This haplotype is unique in several regards, first and most importantly the B46 serotype ... recombination between this haplotype, A24 and A11 bearing alleles, probably in a local or tribal population ... of the most frequent, if not the most frequent A B haplotype in the world, even though it is absent ... f8f6f8 HLA A2 B46 haplotype frequencies style background efe5ef freq Rank in style background eee5ef ... Northern Han 1.8 colspan 4 sup 1 sup highest freq. A B hap in Asia. This haplotype is unique in several ... between this haplotype, A24 and A11 bearing alleles, probably in a local or tribal population ... frequent, if not the most frequent A B haplotype in the world, even though it is absent from the indigenous populations of most peoples in the world. The most common haplotype, and probably the ancestral haplotype given its distribution from the Ninhivet to Indonesia is A font color Purple ... DQA1 font color DarkOrchid 0302 font DQB1 font color DarkGreen 0303 font A different haplotype that is more ... more details
named the Cohen Modal Haplotype CMH . However it subsequently became clear that this six marker ... Cohen modal haplotype at DYS391, carrying 11 rather than 10 repeats , as well as, have a completely ... have the J1 Cohen Modal Haplotype. In a subsequent study the next year Thomas MG et al. , 1998 , ref ... STR results clustered around a single pattern they named the Cohen Modal Haplotype class wikitable ... hrhdavid English frames index.html title Cohanim Modal Haplotype CMH finds the Ten Lost ... 76 3 3 4 6 100 The detailed breakdown by 6 marker haplotype the paper s online only table B suggests ... Jews could have the Cohen Modal Haplotype. It is now clear that this is not the case. The Cohen Modal Haplotype CMH , whilst notably frequent amongst Cohens, is also far from unusual in the general ... Y STR markers to determine whether there is an extended characteristic Cohen haplotype. Haplogroup ... of genetic markers corresponding to the Cohen Modal Haplotype. Low frequencies of individuals with these lineages ..., this is an example of haplotype convergence Basically the haplotype distribution within one lineage Haplogroup overlaps with the haplotype distribution of another lineage it is like overlapping branches ... a common haplotype in the same lineage Haplogroup . Convergence Mutation is a random process ... other haplogroups, including Haplogroup R1b . The haplotypes of these Haplotype J2 Kohanim ... Haplotype an important component in the sharing of Ashkenazic and Sephardic Israelite Y chromosomes ... In the table below, the first line gives the original 6 marker Cohen Modal Haplotype CMH 6 , which was the basis for the original published papers. The second gives an extended 12 marker haplotype ... J1 and J2 are also shown. It is apparent that in both cases, their haplotype clusters are also centred very close to the Cohen modal haplotype. However, because of the much greater time ..., the J1 and J2 haplotype clusters are much more diffusely spread out. Thus although the CMH 6 ... more details
left Sindhi people Sindhi Pakistan 0.5 Haplotypes There is a known haplotype that covers a distance ... color DarkGreen 0402 font and maybe indicative of recent long range migration. This haplotype is found ... Taiwanese, Northern Philippines, Japanese, Orochon, Tibetians. The A Cw B component of the haplotype ... and Native American populations. The Cw 0803 allelic variant of this haplotype is found in Japan ... of Japan Map en.png Thumb 300px right Sea of Japan Another haplotype that shows long distance relationships ... font This haplotype is seen in the Taiwan aboriginal population, Okinawan, Japanese, Asian Americans, Orochon, Korean and Hispanic American populations. This haplotype might be extended with DRB1 font ... more details
, van der Ven K title HLA class II haplotype associations with ovarian cancer. journal Int J Cancer volume ... 01 DQB1 05 haplotype Rheumatoid arthritis ref cite journal author Pascual M, Nieto A, L pez Nevot ..., but is linked to HLA DQ1 and HLA DQ5 DQ5 serotypes. One haplotype found in caucasians is the HLA A1 ... more details
region haplotype haplotypes have been linked with endurance capacity in human subjects. ref name ... their haplotype with the increase in VO2 max VO sub 2 sub max after an eight week endurance training ... more details
one source date April 2008 main Immunosuppressive drug An immunosuppressant is any substance that performs immunosuppression of the immune system . They may be either exogenous, as immunosuppressive drug s, or endogenous, as, e. g., testosterone . ref cite journal last Fimmel coauthors Zouboulis CC year 2005 title Influence of physiological androgen levels on wound healing and immune status in men journal Aging Male volume 8 pages 166&ndash 174 pmid 16390741 doi 10.1080 13685530500233847 first S issue 3 4 ref When the immune system function is suppressed, there is an increased susceptibility to infectious diseases and cancers. The term immunotoxin is also sometimes used incorrectly to label undesirable immunosuppressants, such as various pollutants . Polychlorinated biphenyls PCB and the herbicide DDT are immunosuppressants. fact date May 2009 Uses Immunosuppressants may be prescribed when a normal immune response is undesirable, such as in autoimmune diseases . After an organ transplantation , the body will nearly always reject the new organ s due to differences in human leukocyte antigen haplotype s between the donor and recipient. As a result, the immune system detects the new tissue as hostile , and attempts to remove it by attacking it with recipient leukocytes , resulting in the death of the tissue. Immunosuppressants are applied as a countermeasure the side effect is that the body becomes more vulnerable to infections and malignancy, much like in an advanced HIV infection. See also BK virus more dangerous to the immunosuppressed References reflist Immunosuppressants Category Immunosuppressants Antineoplastic drug stub es Inmunosupresor sr Imunosupresant zh ... more details
Two or more alleles are identical by descent IBD if they are identical copies of the same ancestral allele. This property is often used in genetic linkage to identify alleles which are potential candidates for harboring mutations causing a genetic disease. A common way to identify alleles as identical by descent is usually carried using single nucleotide polymorphism SNP data. If enough SNP in two alleles are observed as the same, then the two alleles are inferred as IBD. Although this does not guarantee that the two alleles are identical. Even if they are indeed derived from the same ancestral allele, they could harbor different mutations which arose during the inheritance process, like single nucleotide mutations, insertion, deletions or others. Given the new importance that IBD alleles are assuming in genetic association genetic association studies , a new definition of IBD that would better suit the underlying inheritance property would be that two or more alleles are be identical by descent IBD if they have been inherited from the same ancestral allele without genetic recombination recombination events. See also Identity by type References cite journal title Detection of sharing by descent, long range phasing and haplotype imputation journal Nature Genetics volume 40 year 2008 issue 9 pages 1068 1075 last1 Kong first1 A. last2 Masson first2 G. last3 Frigge first3 M.L. last4 Gylfason first4 A. last5 Zusmanovich first5 P. last6 Thorleifsson first6 G. last7 Olason first7 P.I. last8 Ingason first8 A. last9 Steinberg first9 S. author11 others doi 10.1038 ng.216 pmid 19165921 Category Classical genetics ... more details
wiktionary Cohen cohen kohen Cohen may refer to Kohen , a Jewish priest Cohen surname , a common Jewish surname Media Cohen the Barbarian , a character in Terry Pratchett s Discworld novels Cha Cha Cohen , a band formed in 1994 including singer Jacqui Cohen Matt Cohen Prize , an award given annually by the Writers Trust of Canada to a Canadian writer Shaughnessy Cohen Award , a Canadian literary award Leonard Cohen , a folk singer songwriter, musician, poet, and novelist. Roger Cohen , a British born journalist and author. He is a columnist for The New York Times and International Herald Tribune. Locations The Cohen Building of The Judd School in Tonbridge, England Cohen kuhi Tau 4 , a star 420 light years away from Earth in the Taurus Constellation Science Saul B. Cohen , an American human geographer Cohen Macaulay ring , a particular type of commutative ring in mathematics Cohen Modal Haplotype , a DNA signature identified with Biblical Aaron, brother of Moses Cohen s kappa , a statistical measure of inter rater reliability Law Clinger Cohen Act , a United States federal law that is designed to improve the way the federal government acquires and manages information technology Flast v. Cohen , a U.S. Supreme Court case holding that a taxpayer has standing to sue the government to prevent an unconstitutional use of taxpayer funds Cohen v. California , a U.S. Supreme Court case dealing with freedom of speech Cohen v. Cowles Media Co. , a U.S. Supreme Court case establishing that freedom of the press does not exempt newspapers from generally applicable laws Cohens v. Virginia , a U.S. Supreme Court decision most noted for the Marshall Court s assertion of its power to review state supreme court decisions in criminal law matters See also Coen disambiguation Cohn Kagan Kahane lookfrom Cohen intitle Cohen disambig cs Cohen fr Cohen ko it Cohen he lv Koens hu Cohen egy rtelm s t lap ja ru sk Cohen fi Cohen sv Cohen uk ... more details
cite journal author Trachtenberg EA, Yang H, Hayes E, et al. title HLA class II haplotype associations ... doi ref By haplotype MuSK antibody positive myasthenia gravis HLA DR14 DQ5, ref name pmid16769963 ... more details
SE Asia and Oceania. The most prominent of these haplotypes is A34 Cw11 1 B56. This haplotype ... between these peoples. Another frequently found haplotype is the A34 B61 A 3401 Cw 04 B B4002 haplotype. This haplotype has a similar distribution as A34 B56. These haplotypes indicate that long range ... more details
PBB geneid 81392 Olfactory receptor 2AE1 is a protein that in humans is encoded by the OR2AE1 gene . ref name entrez cite web title Entrez Gene OR2AE1 olfactory receptor, family 2, subfamily AE, member 1 url http www.ncbi.nlm.nih.gov sites entrez?Db gene&Cmd ShowDetailView&TermToSearch 81392 accessdate ref The PBB Summary template is automatically maintained by Protein Box Bot. See Template PBB Controls to Stop updates. PBB Summary section title summary text Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G protein coupled receptors GPCR arising from single coding exon genes. Olfactory receptors share a 7 transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. ref name entrez See also Olfactory receptor References reflist Further reading refbegin 2 PBB Further reading citations cite journal author title Toward a complete human genome sequence. journal Genome Res. volume 8 issue 11 pages 1097 108 year 1999 pmid 9847074 doi 10.1101 gr.8.11.1097 cite journal author Thompson EE, Kuttab Boulos H, Yang L, et al. title Sequence diversity and haplotype structure at the human CYP3A cluster. journal Pharmacogenomics J. volume 6 issue 2 pages 105 14 year 2006 pmid 16314882 doi 10.1038 sj.tpj.6500347 refend External links MeshName OR2AE1 protein, human NLM content Olfactory receptors The PBB Controls template provides controls for Protein Box Bot, please see Template PBB Controls for details. PBB Controls update page yes require manual inspection no update protein box yes update summary yes update citations yes Category G ... more details
Orphan date October 2008 Snagger ref Edlund CK, Lee WH, Li D, Van Den Berg DJ, Conti DV. http www.biomedcentral.com 1471 2105 9 174 Snagger A user friendly program for incorporating additional information for tag SNP selection . BMC Bioinformatics. 2008 Mar 27 9 1 174 ref is a bioinformatics software program for selecting tag SNP s using pairwise r sup 2 sup linkage disequilibrium . It is implemented as extension to the popular software, Haploview ref Barrett J.C., Fry B., Maller J., Daly M.J. 2005 . http bioinformatics.oxfordjournals.org cgi reprint 21 2 263?maxtoshow &HITS 10&hits 10&RESULTFORMAT &fulltext haploview&searchid 1&FIRSTINDEX 0&resourcetype HWCIT Haploview analysis and visualization of LD and haplotype maps . Bioinformatics 21 263 265. ref , and is freely available under the MIT License . Snagger distinguishes itself from existing single nucleotide polymorphism SNP selection algorithms, including Tagger ref de Bakker P. I., Yelensky R., Pe er I., Gabriel S. B., Daly M. J., Altshuler D. 2005 . http www.nature.com ng journal v37 n11 pdf ng1669.pdf Efficiency and power in genetic association studies . . Nature Genetics 37 1217 1223. ref , by providing user options that allow for 1 Prioritization of tagSNPs based on certain characteristics, including platform specific design scores, functionality i.e. coding status , and chromosomal position 2 Efficient selection of SNPs across multiple populations 3 Selection of tagSNPs outside defined genomic regions to improve coverage and genotyping success 4 Picking of surrogate tagSNPs that serve as backups for tagSNPs whose failure would result in a significant loss of data Haploview with Snagger has been developed and is maintained at the Genomics Center at the University of Southern California . References references External links http snagger.sourceforge.net Snagger Homepage http www.broad.mit.edu mpg haploview Haploview Homepage http www.broad.mit.edu mpg tagger Tagger Homepage Category Bioinformatics software ... more details
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