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Encyclopedia results for Sequence profiling tool

Sequence profiling tool





Encyclopedia results for Sequence profiling tool

  1. Sequence profiling tool

    A sequence profiling tool in bioinformatics is a type of software that presents information related to a gene tic sequence, gene name, or keyword input. Such tools generally take a query such as a DNA , RNA , or protein sequence or keyword and search one or more database s for information related to that sequence ... data based profilers Image SEQUEROME display.JPG thumb 350px Display of sequence profiling features on a http www.sequerome.org SEQUEROME browser A typical sequence profiling tool carries this further ... to compile. Many sequence profiling tools are software portals or gateways that simplify the process ... sequence. For example, users might use the sequence alignment and search tool BLAST to identify ... a DNA construct containing the gene. Sequence profiling tools serve to automate and integrate the process ... are presented in a format unique to each tool s main focus. Profiling tools based on keyword ... interface. Consequently, future generation of sequence profiling tools would include ability to collaborate ... more comprehensive and more user friendly methods of sequence profiling makes this an active area ... and usage Deleted image removed Image NCBI.JPG thumb 350px A typical example of a keyword profiling tool http www.ncbi.nlm.nih.gov gquery gquery.fcgi?itool toolbar Entrez The post genomics era ... of primary sequence information, as well as tertiary structure protein structures , gene annotations, sequence alignment s, and other common bioinformatics tasks. In general, there exist three ... is in development or the end point of the analysis is of commercial value. Typical scenarios of a profiling ... focused, are frequently modified, or use custom versions of common file formats. Advantages of sequence profiling tools include the ability to use multiple of these specialized tools in a single ... Bioinformatic Harvester Most of the profiling tools available on the web today fall into this category. The user, upon visiting the site tool, enters any relevant information like a keyword ...   more details



  1. Profiling

    Profiling , the extrapolation of information about something, based on known qualities, may refer specifically to Profiling practices Information science Forensic profiling , used in several types of forensic science s Offender profiling Profiling computer programming in software engineering Racial profiling Sexual orientation profiling See also Profile disambig de Profiling ko no Profilering ...   more details



  1. Ribosome profiling

    EDIT BELOW THIS LINE Ribosome profiling is a technique that uses messenger RNA mRNA to determine what proteins are being translated. It produces a global snapshot of all the ribosomes active in a Cell biology cell at a particular moment. Consequently, this enables researchers to identify the location of translation start sites, their distribution, and the speed of the translating ribosomes . ref name Weiss Weiss R., Atkins J. 2011 .Translation Goes Global. Molecular Biology .pp. 1509 1510. ref . History Ribosome profiling was formed from the old discovery that the mRNA within a ribosome can be isolated through the use of nucleases that degrade unprotected mRNA regions. This technique analyzes the ratio of multiple specific mRNA s to proteins being synthesized, to provide insight into global gene expression. Prior to its development, efforts to measure this ratio included microarray analysis on the RNA isolated from polysomes, as well as translational profiling through the affinity purification of epitope tagged ribosomes. However, neither of these techniques provides the positional and quantitative information of ribosome profiling. . ref name Weiss Procedure Lyse the yeast cells and isolate the mRNA molecules bound to ribosomes. Immobilize complexes commonly with cycloheximide but other chemicals can be employed and generate cross linking using formaldehyde . Tag the mRNA ribosome complexes in order to isolate them. Using nucleases, cut away all of the RNA not directly bound to the ribosome. Phenol chloroform purification of mixture to remove proteins. Convert RNA to cDNA using reverse transcriptase . Sequence cDNA strand. Compare sequence results to chromosome strands to determine the regions that are most prevalently being translated. . ref name Ingolia Ingolia N., Ghaemmaghami S., Newman J., Weissman J. 2009 .Genome Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling. science .pp. 218 223. ref Materials RNA ribosome complexes ...   more details



  1. Predictive profiling

    to Predictive Profiling as another tool in their arsenal for identifying threat in the field. ref ...orphan date June 2010 Predictive profiling is a method of threat assessment designed to predict and categorize ... right upright Description Predictive profiling offers a unique approach to threat mitigation that begins ... and to meeting any set of security requirements. In Predictive Profiling, one uses only the operational ... suspicion indicators in a protected environment. When predictively profiling a situation, person ... The person has dropped a bomb somewhere in the airport and is now exiting Predictive Profiling differs from racial profiling which uses race and ethnicity as the only factors against which to evaluate potential threat. In fact, proponents of Predictive Profiling would dismiss the use of racial profiling ... as a tool for identifying potential threat can be illegal and it can also be counterproductive. ref http homelandsecurity.tamu.edu media weekly radio profiling predictive profiling 26 june 2008 149.html ... can use security measures which are solely based on racial profiling against a security system ... towards focusing on Arab and Muslim populations as potential terrorist threats. Predicting profiling ... Predictive Profiling uses the method of attack and its correlating Suspicion Indicators as the basis ... of the method. Sometimes Predictive Profiling is referred to as conducting a situational threat .... ref http www.chameleonassociates.com blog 2009 11 predictive profiling examples of suspicion indicators ... is reflected in Predictive Profiling methods. Risk is measurable, it has levels. For example ..., the goal of predictive profiling is to determine whether or not a person, object or situation represents a real threat. The logic of predictive profiling continues insofar as our security efforts ... Deploy The proactive security process that is employed using Predictive Profiling consists of three ... human Predictive Profiling relies heavily on the human element in security. While detection can ...   more details



  1. Geographic profiling

    profiling is an investigative tool that can be seen as a strategic information management system ...&sig AHIEtbQ8WshmQC0NR3Fpqcqo1AzbZMPvSQ Geographic Profiling Analysis GPA training programme ensures that geographic profiling analysis remains a recognized law enforcement tool a meaningful ... geographic profiling is a useful tool for assisting investigations, like any other models there are numerous ... profiling A new tool for law enforcement. The Police Chief , pp. 51 59. Meaney, R. 2004 ...Geographic profiling is a criminal investigative methodology that analyzes the locations of a connected ..., p. 136. ref Geographic profiling is growing in popularity and, combined with offender profiling, can be a helpful tool in the investigation of serial crime. History While the use of spatial analysis ... map with pins stuck in it , the formalized process known today as geographic profiling originated ... , in 1989. ref cite web url http www.ncjrs.gov html nij mapping ch6 1.html title Geographic profiling ... first Keith date December 1999 accessdate 2011 03 14 ref The leading developer of geographic profiling ... the most likely location of where the serial offender lives. Geographic profiling model is based on the assumption ... profiling is in environmental criminology. ref Wortley and Mazerolle 2008, p. 137 138. ref ... in geographic profiling. It suggests that crime sites and opportunities are not random. There is an emphasis ... whose approach to geographic profiling detailed around the circle theory of environmental range. In 1993 ... a computerized geographic profiling algorithm called http docs.google.com viewer?a v&q cache ... Geographic profiling is a sub type of offender or criminal profiling the inference of offender ... profiling. If psychological profiling is the who, geographic profiling is the where. All certified ... , a professional profiling organization first begun by investigators trained by the Federal Bureau ... , a geographic profiling formula to predict where a serial criminal lives Crime mapping Notes ...   more details



  1. Offender profiling

    Refimprove date November 2007 Original research date September 2007 Offender profiling , also known as criminal profiling , is a behavioral and investigative tool that is intended to help Detective investigators ... later, the technique became a more sophisticated and systematic profiling tool known as the Criminal ... sciences , Charles C Thomas Publisher, 2009, pp.226 ref Offender profiling is also known as criminal profiling, criminal personality profiling, criminological profiling, behavioral profiling or criminal investigative analysis. Geographic profiling is another method to profile an offender. Television ... the three main goals of criminal profiling ref Holmes, R. M., & Holmes, S. T. 2008 . Profiling Violent Crimes An Investigative Tool 4 ed. . Thousand Oaks Sage Publications, Inc. ref The first is to provide ... murderers and prostitutes as their victims Difficulty profiling perpetrators and victim vulnerability ... in the profile of being incapable of closeness. One type of criminal profiling is referred to as linkage ... Profiling , 3 3 , 183 191. doi 10 1002 jip.51 ref Gathering many aspects of the offender s crime ... of profiling can be traced back to as early as the Middle Ages , with the inquisitors trying ... others realized the potential Clarify date February 2010 of profiling in the 19th century although ... needed date February 2010 A version of profiling is thought to have been used in the 1940s, when ... the police investigation. ref cite journal last Schlesinger first Louis title Psychological profiling ... of the offender. This caught the attention of the FBI, who then worked to develop a technique for profiling ... had predicted. However, Malcolm Gladwell has written that offender profiling is not a science at all ... Dangerous Minds Criminal profiling made easy. last Gladwell first Malcolm date 2007 11 12 publisher ... of offender profiling, and had included some of the ideas in his applied criminology course. He met Dr. Brussel and exchanged investigative ideas and psychological strategies in profiling ...   more details



  1. DNA profiling

    Distinguish Full genome sequencing more footnotes date May 2011 ForensicScience DNA profiling also called ... s identifier. DNA profiling should not be confused with full genome sequencing . ref Kijk magazine ... publisher Accessexcellence.org date accessdate 2010 04 03 ref DNA profiling uses repetitive repeat ... to have the same VNTRs. The DNA profiling technique was first reported in 1984 ref Joseph Wambaugh ... New York A Perigord Press Book, 1989 , 202. ref DNA profiling process Image D1S80Demo.gif ... The first methods for finding out genetics used for DNA profiling involved restriction enzyme ... end leads toward the other primer. In this fashion, two new copies of the sequence of interest ... hours or less. With the invention of the polymerase chain reaction PCR technique, DNA profiling took .... STR analysis Main Short tandem repeats The method of DNA profiling used today is based on PCR ... genetics loci locations on a chromosome are targeted with sequence specific primers and amplified .... Thus STR analysis provides an excellent identification tool. The more STR regions that are tested in an individual ... DNA profiling systems are in use. In North America, systems which amplify the CODIS 13 core loci ... profiling systems are based on multiplex reactions, whereby many STR regions will be tested at the same ... sequence, depending on the markers inherited from the parents. The combination of marker sizes ... of the mtDNA, then sequence each region and compare single nucleotide differences to a reference ... sequence comparisons, so some expertise on the part of the analyst is required. mtDNA is useful ... 1998 the DNA profiling system supported by The National DNA Database in the UK is the SGM DNA profiling ... to use DNA profiling as evidence of genetic relationship, but testing that shows no relationship ... been several cases of DNA profiling that falsely suggested that a mother was unrelated to her children ... Attorney DNA Resources accessed April 20, 2011. ref and has also been used as a tool to exonerate the falsely ...   more details



  1. Forensic profiling

    Forensic profiling refers to the study and the exploitation of Trace evidence traces in order to draw a Offender profiling profile relevant to the supporting of various security tasks, mostly in the criminal justice system. The term forensic in this context refers to information that is used in court as evidence Harv Geradts Sommer 2006 p 10 . The traces originate from criminal or litigious activities themselves. However traces are information that is not strictly dedicated to the court. They may increase knowledge in broader domains linked to security that deal with investigation, intelligence, surveillance, or risk analysis Harv Geradts Sommer 2008 p 26 . Forensic profiling is different than offender profiling , which only refers to the identification of an offender to the psychological profile of a criminal. In particular, forensic profiling should refer to profiling practices in general ... of a group or category Harv Geradts Sommer 2006 p 41 . Profiling techniques Forensic profiling ... for forensic profiling. Data available for forensics profiling The data available to law enforcement ... links between cases, series . Types of forensics profiling DNA profiling Used for the identification ... the integrity of particular features Harv Popescu Farid 2005 . Illicit drug profiling , which refers ... Technology . Offender profiling , i.e. psychological profiling of the criminal. Forensic profiling issues The use of profiling techniques represents threats to the privacy of the individual and to the protection ... are available to address some of the issues associated with forensic profiling. For instance, in Europe ... of Individuals with regard to Automatic Processing of Personal Data. See also DNA profiling Forensics Forensic identification Profiling Profiling practices Trace evidence Offender profiling Use of social ... first2 Peter year 2008 title D6.7c Forensic Profiling journal FIDIS Deliverables volume 6 issue 7c url ... CIS302 20Lectures content PBL1 ribaux2007heroin.pdf pmid 16884878 reflist Category Offender profiling ...   more details



  1. Thermal profiling

    improvement through thermal profiling the goal of thermal profiling is to always increase quality ...?AwardNumber 0321449 High performance thermal profiling of photonic integrated circuits ref optics, ref Kapusta, Evelyn, Using thermal profiling to monitor optical feedback in semiconductor l http dspace.nitle.org ... Thermal profiling for parallel on line monitoring of biomass growth in miniature stirred bioreactors ... ref food science, ref B. Strahm & B, Plattner, Thermal profiling Predicting processing characteristics ... and Raymond A. Donelick Thermal and isotopic profiling of the Pipeline hydrothermal system Application ... Leary first Brian coauthors Michael Limberg title Profiling Guide publisher DiggyPod year 2009 pages ... Michael Limberg title Profiling Guide publisher DiggyPod year 2009 pages 16 chapter 1 isbn 978 0 9840903 ... cite book last O Leary first Brian coauthors Michael Limberg title Profiling Guide publisher DiggyPod ... title Profiling Guide publisher DiggyPod year 2009 pages 17 chapter 1 isbn 978 0 9840903 0 3 accessdate .... ref name O Leary 2009 18 cite book last O Leary first Brian coauthors Michael Limberg title Profiling .... ref name O Leary 2009 20 cite book last O Leary first Brian coauthors Michael Limberg title Profiling ... from becoming entangled in the oven during profiling. Epoxies come in both insulator and conductor ... out within an organization follows a defined sequence of steps and has quantified financial targets ... the highest tolerance value of the component. Further, some software profiling packages may come with additional ... Michael Limberg title Profiling Guide publisher DiggyPod year 2009 pages 31 chapter 3 isbn 978 0 9840903 .... To ensure repeatability, profiling software includes both automatic distance measurements and temperature ... title Profiling Guide publisher DiggyPod year 2009 pages 41 chapter 4 isbn 978 0 9840903 0 3 accessdate ... in the set points of the oven must be changed to the profiler software. The solder paste library of profiling ... Limberg title Profiling Guide publisher DiggyPod year 2009 pages 46 49 chapter 4 isbn 978 0 9840903 ...   more details



  1. Carbon profiling

    orphan date August 2009 refimprove date July 2009 Carbon profiling ref name ReferenceA Carbon Profiling was published in The Architects Journal on the 26.03.09 ref is a mathematical process that calculates how much Carbon dioxide Carbon Dioxide is put into the atmosphere from 1msq of space in a building over 1 year. The metric analysis this in two parts, 1 operational Greenhouse gas carbon emissions and 2 embodied carbon emissions, which are then added together to produce an overall figure which is termed the Carbon Profile . Embodied Carbon Emissions relate to the amount of Carbon Dioxide emitted into the atmosphere from creating and maintaining the materials that form the building e.g. the carbon dioxide released from the baking of bricks or smelting or iron. In the Carbon Profiling Model these emissions are measured in ECE s Embodied Carbon Efficiency in KgCO2 msq year Occupational Carbon Emissions relate to the amount of Carbon Dioxide emitted into the atmosphere from the direct use of energy to run the building e.g. the heating or electricity used by the building over the year. In the Carbon Profiling Model these emissions are measured in BER s Building Emission Rate in KgCO2 msq year. The BER is a Departments of the United Kingdom Government United Kingdom government accepted Units of measurement unit of measurement that comes from an approved calculation process called sBEM Simplified Building Emission Model The purpose of Carbon Profiling ref name ReferenceA is to provide a method of analyzing and comparing both operational and embodied carbon emissions at the same time. With this information it is then possible to allocate a projects resources in such a way to minimize the total amount of Carbon Dioxide emitted into the atmosphere through the use of a given piece of space. A secondary benefit is that having quantified the Carbon Profiling ref name ReferenceA of different ... originally developed Carbon Profiling in December 2007. References Reflist DEFAULTSORT Carbon Profiling ...   more details



  1. Racial profiling

    Globalize USA date December 2010 POV date April 2012 Racial profiling refers to the use of an individual ... is controversial and is illegal in some nations. Definition See also Offender profiling The concept of racial profiling has been defined in many ways, including Any police initiated action that relies ... A Resource Guide on Racial Profiling Data Collection Systems url http www.ncjrs.gov pdffiles1 bja ... to make a traffic stop. sub General Accounting Office sub ref name gao cite web title Racial Profiling ... two clearly distinguishable definitions of the term racial profiling a narrow definition and a broad definition... Under the narrow definition, racial profiling occurs when a police officer stops ...... Under the broader definition, racial profiling occurs whenever police routinely use race as a factor ... action. sub Jim Cleary sub ref name cleary cite web last Cleary first Jim title Racial Profiling ... AZ Report cite web title Report on Racial Profiling publisher Office of the Arizona Attorney General ... racial 20profiling.PDF accessdate 2010 05 11 ref In the United States See also Airport racial profiling in the United States Legality At a Federal level, racial profiling is challenged by the Fourth ... , President George W. Bush declared, Racial profiling is wrong, and we will end it in America. In so ... Profiling Fact Sheet url http www.justice.gov opa pr 2003 June racial profiling fact sheet.pdf publisher ..., awarded the Northeastern research team a grant to create this web based Racial Profiling Data ... community initiatives, and methodological tools that can be used to collect and analyze racial profiling ... year 201 title Racial Profiling Data Collection Resource Center url http www.racialprofilinganalysis.neu.edu ...... has been opposed to racial profiling and has done more to indicate its opposition than ever in history ... Agencies forbidding racial profiling by federal law enforcement officials. ref cite web year 2007 title Threat and Humiliation Racial Profiling, National Security, and Human Rights in the United ...   more details



  1. Data profiling

    Notability null date August 2010 Refimprove date August 2010 Data profiling is the process of examining ... where key data is needed, or data governance for improving data quality. Data Profiling in Relation to Data Warehouse Business Intelligence Development Introduction Data profiling is an analysis of the candidate ... Toolkit , Second Edition, Wiley Publishing, Inc., ISBN 9780470149775 , p. 297 p. 376 ref Profiling ... Kaufmann Publishers, ISBN 9780123742254 , p. 94 96 ref Thus the purpose of data profiling is both to validate ... sponsors expectations. ref name Kimball2008 How to do Data Profiling Data profiling utilizes ... metadata information obtained during data profiling could be data type, length, discrete values, uniqueness ... are used for data profiling to ease the process. ref name Kimball2008 ref name Loshin2009 ref name ... Value of Data Profiling , Kimball Group, Number 59, September 14, 2004, www.rkimball.com html designtipsPDF ... when going from single column, to single table, to cross table structural profiling. Therefore, performance is an evaluation criterion for profiling tools. ref name Loshin2003 When to Conduct Data Profiling According to Kimball, ref name Kimball2008 data profiling is performed several times and with varying intensity throughout the data warehouse developing process. A light profiling assessment ... profiling is done prior to the dimensional modeling process in order to see what it will require to convert ... what data to extract and which filters to apply. ref name Kimball2008 Benefits of Data Profiling The benefits of data profiling is to improve data quality, shorten the implementation cycle of major ... embedded in data itself is one of the significant benefits derived from data profiling. ref name Loshin2003 Data profiling is one of the most effective technologies for improving data accuracy in corporate databases. ref name Olson2003 Although data profiling is effective, then do remember ... Profiling Category Data management Category Data quality de Data Profiling fr Data profiling ...   more details



  1. Profiling practices

    Profiling Information science refers to the whole process of construction and application of profiles generated by computerized profiling technologies. What characterizes profiling technologies is the use ... to identify or represent people they can be called profiles . Other than a discussion of profiling technologies or population profiling the notion of profiling practices is not just about the construction ... 2008 Harv Elmer 2004 . Profiling is not simply a matter of computerized pattern recognition ... sorting. Real time machine profiling constitutes the precondition for emerging socio technical infrastructures ... those data that are useful or interesting. The development of profiling technologies must ... the profiler with sets of correlated data that are used as profiles . The profiling process The technical process of profiling can be separated in several steps Preliminary grounding The profiling ... belong to the phase in which the profile is under construction. However, profiling also refers to the application ... of profiles can lead to the reiterant possibly real time fine tuning of specific previous steps in the profiling ... of profiling is both dynamic and adaptive. A good illustration of the dynamic and adaptive nature of profiling is the Cross Industry Standard Process for Data Mining CRISP DM . Types of profiling practices In order to clarify the nature of profiling technologies some crucial distinctions have to be made between different types of profiling practices, apart from the distinction between the construction ... down profiling or supervised and unsupervised learning , and between individual and group profiles ... can be generated by testing a hypothesized correlation. This is called top down profiling or supervised ... with a hypothesis and consists of testing its validity. The result of this type of profiling is the verification or refutation of the hypothesis. One could also speak of deductive profiling. On the other ... will be determinate of the patterns that can be found. In the case of machine profiling, potential ...   more details



  1. Corporate profiling

    Corporate profiling is a process that delivers an in depth blueprint of the organizational structure , its technology, people, processes, up stream and down stream customers and their relationships. Using this process, organizations are able to identify where the interlinked relationships occur. Profiling also identifies any common or causal factors between corporate, business and Information technology and more significantly, it elucidates hidden or not so obvious factors that would otherwise be over looked. In order for comprehensive profiling to be undertaken there must be a common objective between the three business components corporate, business and IT and a level of executive support and cohesion that will drive tri directional communication channels throughout the business components. cite web url http www.via nova architectura.org artikelen tijdschrift cohesion of enterprise models.html title Cohesion of Enterprise Models accessdate 2009 01 28 publisher VIA NOVA ARCHITECTURA date 2008 11 30 Dead link date October 2010 bot H3llBot Information technology The process of corporate profiling ensures that all factors are considered, thereby significantly reducing the opportunity for Information technology Project Failure cite web url http www.softwaremag.com archive 2001feb collaborativemgt.html title Collaborating on Project Success accessdate 2009 01 28 work Collaboration Development & Management publisher Software Magazine and Wiesner Publishing date February March 2001 . Corporate Profiling is the first step to undertaking an IT implementation. cite web url http it.toolbox.com blogs erp roi the first step to successful erp get your house in order 12214 title The First Step to Successful ERP Get Your House in Order accessdate 2009 01 28 work In Search of Business Value & ROI Achieving IT Benefits Realization publisher Toolbox for IT date 10 11 2006 Category Aspects of organizations ...   more details



  1. Tool

    Two other uses the American rock band Tool band other uses See Equipment disambiguation File 20060513 toolbox.jpg thumb A modern toolbox . A tool is any item that can be used to achieve a goal , especially ... tools is technology . Tool use by human s dates back millions of years, and other animals are also ... Les Eyzies de Tayac MNP.jpg thumb 200px Prehistoric stone tool s over 10,000 years old, found in Les Combarelles cave, France File MaryRose carpentry tools1.jpg thumb 200px Carpentry tool s recovered ...? Rethinking the emergence of hominin tool use. Evolutionary Anthropology Issues, News, and Reviews ... of the Stone Age marks the era when hominina hominin s first began manufacturing stone tool ... stone tool forms is the hand axe . Tools are the most important items that the ancient ... employment of new energy sources water waterwheel s and wind windmill s . Machine tool s occasioned ... force along a narrow face. Ideally, the edge of the tool needs to be Hardness harder than the material ... computing printer Shaping tools, such as mold s, Jig tool jigs , trowel s. Fastening tools, such as welder ... be combinations of other tools. An alarm clock is for example a combination of a measuring tool the clock and a perception tool the alarm . This enables the alarm clock to be a tool that falls outside ... defender s and biohazard suits. Tool substitution Often, by design or coincidence, a tool may share ... for other tools, either as a makeshift solution or as a matter of practical efficiency. One tool does it all is a motto of some importance for workers who cannot practically carry every specialized tool ... day and needs to do jobs in a customer s house. Tool substitution may be divided broadly into two ... tool. Substitution as makeshift is when human ingenuity comes into play and a tool is used for its ... apparatuses, especially in older mechanical devices. In many cases a cheap tool could be used to occupy ... by design , or multi purpose . This class of tools allows the use of one tool that has at least ...   more details



  1. Linguistic profiling

    Sociolinguistics Linguistic profiling is the practice of identifying the social characteristics of an individual .... Linguistic profiling extends to issues of Legal process legal proceedings , employment opportunities, and education . The theory is frequently described as the auditory equivalent of racial profiling ... origin. Baugh s theory is distinct from linguistic profiling as defined by Hans van Halteren from ... categories within which they are included. ref Hans, van Halteran. Linguistic Profiling for Author Recognition and Verification. Univ. of Nijmegen. N.p., n.d. Web. 9 Oct. 2011. ref Linguistic profiling and discrimination An important distinction exists between the many uses of linguistic profiling ... voice was used in the prosecution of a suspect. The negative effects of linguistic profiling are seen ... is found in Baugh s description of expressions of ethnic pride. ref Baugh, John, Linguistic Profiling ... the Bias unbiased use of linguistic profiling. ref Salaberry, M. Rafael. Language allegiances and bilingualism ... profiling Race Between racial groups The primary research done on linguistic profiling was a result ... and visual cues pointed to overt discrimination based on race. ref Baugh, John, Linguistic Profiling ... racial groups While much evidence has been collected describing linguistic profiling between racial groups within a speech community, linguistic profiling also extends to members within a racial or ethnic ... Linguistic profiling also applies to gender and sexual orientation. Munson conducted a study in which ... Geographic origin Linguistic profiling occurs beyond the spheres of race and ethnicity in the identification ... ref Linguistic profiling in institutions Legal system O. J. Simpson murder trial A well known example ... of linguistic profiling in the case of Sanchez v. People . A witness testified against a suspect ... speech. A similar case is that of Clifford v. Commonwealth , where a testimony of linguistic profiling ... for the use of linguistic profiling Linguist Dennis Preston has presented an expansion of the rulings ...   more details



  1. Phylogenetic profiling

    Phylogenetic profiling is an important and elegant bioinformatics technique in which the joint presence or joint absence of two traits across large numbers of species is used to infer a meaningful biological connection, such as involvement of two different proteins in the same biological pathway. Along with examination of conserved synteny , conserved operon structure, or Fusion gene Rosetta Stone domain fusions , comparing phylogenetic profiles is a designated a post homology technique, in that the computation essential to method begins after it is determined which proteins are homologous to which. A number of these techniques were developed by David Eisenberg and colleagues phylogenetic profile comparison was introduced in 1999 by Pellegrini, et al. ref Pellegrini M, Marcotte EM, Thompson MJ, Eisenberg D, Yeates TO. Proc Natl Acad Sci U S A. 1999 Apr 13 96 8 4285 8. ref Method Over 2000 species of Bacteria , Archaea , and Eukaryotes now are represented by complete DNA genome sequences. Typically, each gene in genome encodes a protein that can be assigned to a particular protein family on the basis of homology . For a given protein family, its presence or absence in each genome in the original formulation is represented by 1 present and 0 absent . Consequently, the phylogenetic distribution of the protein family can be represented by a long binary number with a digit for each genome such binary representations readily are compared with each other to look for correlated phylogenetic distributions. The large number of complete genomes makes these profiles rich in information. The advantage of using only complete genomes is that the 0 values, representing the absence of a trait, tend to be reliable. Theory Closely related species should be expected to have very similar sets of genes. However, changes accumulate between more distantly related species by processes that include ... biological process. Advances and Challenges Phylogenetic profiling has led to numerous discoveries ...   more details



  1. Sequence

    Other uses In mathematics , a sequence is an ordered list of objects or events . Like a Set mathematics ... possibly infinite is called the length of the sequence. Unlike a set, order matters, and exactly the same elements can appear multiple times at different positions in the sequence. A sequence is a Discrete mathematics discrete function mathematics function . For example, C, R, Y is a sequence of letters ..., or Infinite set infinite , such as the sequence of all even and odd numbers even ... notions of sequence, but may be excluded depending on the context. Image Cauchy sequence illustration2.svg right thumb 350px An infinite sequence of real numbers in blue . This sequence is neither increasing, nor decreasing, nor convergent, nor Cauchy sequence Cauchy . It is, however, bounded ... of which e.g. , exact sequence are not covered by the notations introduced below. In addition to identifying the elements of a sequence by their position, such as the 3rd element , elements may be given names for convenient referencing. For example a sequence might be written as a sub 1 sub , a sub ... definition of a finite sequence with terms in a set S is a function mathematics function from 1, 2, ..., n to S for some n 0. An infinite sequence in S is a function from 1, 2, ... to S . For example, the sequence of prime numbers 2,3,5,7,11, is the function 1 2 , 2 3 , 3 5 , 4 7 , 5 11 , . A sequence of a finite length n is also called an n tuple n tuple . Finite sequences include the empty sequence ... sequence or two way infinite sequence . An example is the bi infinite sequence of all even integers , 4, 2, 0, 2, 4, 6, 8 . Multiplicative Let A a sequence defined by a function f 1, 2, 3, ... 1, 2, 3, ... , such that a sub i sub f i . The sequence is multiplicative if f xy f x f y for all x , y ... of sequences A subsequence of a given sequence is a sequence formed from the given sequence by deleting ... of the sequence are a subset of an partially ordered set ordered set , then a monotonically ...   more details



  1. The Sequence

    Infobox musical artist See Wikipedia WikiProject Musicians name The Sequence image caption image size Only for images narrower than 220 pixels background group or band alias origin Columbia, South Carolina Columbia , South Carolina , United States U.S. genre Old school hip hop br Funk years active 1979 1985 label Sugar Hill Records rap Sugar Hill associated acts Spoonie Gee website past members Angie Stone Angie Brown Stone Angie B. br Cheryl Cook Cheryl The Pearl br Gwendolyn Chisolm Blondy The Sequence is a former female old school hip hop trio signed to the Sugar Hill Records rap Sugar Hill label in the early 1980s. The group consisted of Cheryl Cook Cheryl The Pearl , Gwendolyn Chisolm Blondie , and lead singer rapper Angie Stone Angie Brown Stone Angie B. . The group originated from Columbia, South Carolina Columbia , South Carolina as a group of high school cheerleader s. Their most notable single was Funk You Up 1979 , which was the first rap record released by a female group and the second single released by Sugar Hill Records rap Sugar Hill Records . ref name Greenberg1999 Greenberg, Steve Light, Alan ed. 1999 . The VIBE History of Hip Hop . Three Rivers Press. p. 28. ISBN 0609805037 ref Elements of Funk You Up were later used by Dr. Dre for his 1995 single Keep Their Heads Ringin . ref Ego Trip s Book of Rap Lists Book of Rap Lists . 1999. Macmillan Publishers Macmillan ... song Let s Do It Again Discography Albums Sugarhill Presents the Sequence 1980 , Sugar Hill Records rap Sugar Hill The Sequence 1982 , Sugar Hill 51 Black Albums The Sequence Party 1983 , Sugar Hill Compilations Funky Sound 1995 , P Vine The Best of the Sequence 1996 , Deep Beats Monster Jam Back ... class artist id p194849 pure url yes The Sequence . Allmusic . External links http www.discogs.com artist Sequence, The Discography DEFAULTSORT Sequence, The Category African American musical groups ... Musical trios Hiphop band stub no The Sequence ...   more details



  1. FBI method of profiling

    bio.php ref Profiling phases The process this approach uses to determine offender characteristics ... the classification stage profilers attempt to reconstruct the behavioral sequence of the crime, in particular ... of action committed at the crime scene. ref name Canter Canter, D. 2004 . Offender Profiling and Investigative Psychology. Journal of Investigative Psychology and Offender Profiling, 1 1 15. ref This classification ... specific to another type. ref name Canter Much criticism surrounding the FBI process of profiling focuses ..., L., Bennell, C., Mokros, A., & Ormerod, D. 2002 . The Personality Paradox in Offender Profiling ... of the offender profiling system if the classification is not effective. The FBI classification .... ref ref Turvey, B.E. 1999 . Criminal Profiling An Introduction to Behavioural Evidence Analysis ... CCM . See also Forensic psychology Offender profiling Investigative psychology Notes references References Douglas, J.E., Ressler, R.K., Burgess, A.W., & Hartman, C.R. 1986 . Criminal profiling from ... 1997 . Offender profiling research, theory, and practice. Chicester Wiley. Turvey, B.E. 1999 . Criminal Profiling An Introduction to Behavioural Evidence Analysis. San Diego Academic. Woodworth, M., & Porter, S. 2001 . Historical Foundations and Current Applications of Criminal Profiling in Violent ... offender profiling.html DEFAULTSORT Fbi Method Of Profiling Category Law enforcement techniques Category Criminal investigation Category Offender profiling ...   more details



  1. Profiling (computer programming)

    refimprove date January 2009 In software engineering , profiling program profiling , software profiling is a form of dynamic program analysis that measures, for example, the memory profiler usage of memory , the instruction set simulator usage of particular instructions , or frequency and duration of function calls. The most common use of profiling information is to aid program optimization computer science optimization . Profiling is achieved by instrumenting either the program source code or its binary executable form using a tool called a profiler or code profiler . The methodology of the profiler itself classify the profiler as event based, as statistical, as instrumentation , or as simulation. Gathering program events Profilers use a wide variety of techniques to collect data, including ... a basic tool prof that listed each function and how much of program execution time it used. In 1982 ... API, formerly JVMPI JVM Profiling Interface , provides hooks to profilers, for trapping events like calls, class load, unload, thread enter leave. .NET Framework .NET Can attach a profiling agent as a COM server to the CLR using Profiling API. Like Java, the runtime then provides various callbacks ... powerful in that the profiling agent can rewrite the target application s bytecode in arbitrary ways. Python programming language Python Python profiling includes the profile module, hotshot which ... like Python for profiling. Flat profiler in profile.rb, module, and ruby prof a C extension are present ... added to the source code by an automatic tool according to an instrumentation policy. Compiler assisted Example gcc pg ... for gprof, quantify g ... for Quantify Binary translation The tool adds ... the code is instrumented. The program run is fully supervised and controlled by the tool. Examples ... sites products documentation hpc vtune windows jit profiling.pdf Profiling Runtime ... es Profiling fr Profilage de code nl Profiler ja pl Profilowanie pt Gprof ru ...   more details



  1. Consensus sequence

    In molecular biology and bioinformatics , consensus sequence refers to the most common nucleotide or amino acid at a particular position after multiple sequences are aligned. A consensus sequence is a way of representing the results of a multiple sequence alignment , where related sequences are compared to each other, and similar functional sequence motif s are found. The consensus sequence shows which residues are most abundant in the alignment at each position. Sequence analysis Developing software ... sequence motif s can function as regulatory sequence s controlling biosynthesis, or as signal sequence s that direct a molecule to a specific site within the cell or regulate its maturation ... of conservation of these sites. Notation The conserved sequence motifs are called consensus sequences ... example DNA sequence A CT N A YR In this Sequence motif Pattern description notations notation , A means ... at that position. An alternative method of representing a consensus sequence uses a sequence logo . This is a graphical representation of the consensus sequence, in which the size of a symbol is related to the frequency that a given nucleotide or amino acid occurs at a certain position. In sequence ..., the smaller the symbol. Sequence logos can be generated using http weblogo.berkeley.edu WebLogo ... tool written by Gustavo Glusman at the http www.systemsbiology.org Institute for Systems Biology . ref name Schneider2002 cite journal author Schneider TD title Consensus Sequence Zen journal ... significance A protein binding site, represented by a consensus sequence, may be a short sequence ... sequences. Thus a consensus sequence is a model for a putative DNA binding site it is obtained by aligning all known examples of a certain recognition site and defined as the idealized sequence ... sequence to look more like the consensus sequence is known as an up mutation . This kind of mutation ... conserved nucleotides in the consensus sequence are known as down mutations . These types of mutations ...   more details



  1. Tool (disambiguation)

    Wiktionary tool For tools and tutorials intended to simplify, make more efficient, or provide additional functionality to Wikipedians, see Wikipedia Tools A tool is a device that is necessary to, or aids in the performance of an operation. Tool may also refer to Tool band , an American rock band Tool song Tool song , a 7 single by the band Baboon Tool Academy , a reality TV show on VH1 Tool, Texas , a city in east Texas Tool steel , a hard and durable type of steel used to make tools a Programming tool Tulle netting , pronounced tool , a light weight netting or fabric often used in wedding gowns and ballet tutus TOOL Programming Language, the proprietary programming language used by Forte 4GL disambig de Tool pt Tool desambigua o sk Tool ...   more details



  1. Sequence diagram

    UML diagram types Image CheckEmail.png thumb 250px right Example of a UML 2 diagram A sequence diagram in a Unified Modeling Language UML is a kind of interaction diagram that shows how processes operate with one another and in what order. It is a construct of a Message Sequence Chart . A sequence diagram shows object interactions arranged in time sequence. It depicts the objects and classes involved in the scenario and the sequence of messages exchanged between the objects needed to carry out the functionality of the scenario. Sequence diagrams typically are associated with use case realizations in the Logical View of the system under development. Sequence diagrams are sometimes called event diagrams, event scenarios, and Timing diagram Unified Modeling Language timing diagram s. ref OBM 2005 ... Model Document . May 2005. p.91. ref Overview A sequence diagram shows, as parallel vertical lines ... in circle found message in UML or from a border of the sequence diagram gate in UML . UML 2 has introduced significant improvements to the capabilities of sequence diagrams. Most of these improvements .... External links Commons category Sequence diagrams http www.uml.org Current UML Specification by Object ... Introduction to UML 2 Sequence Diagrams by Scott W. Ambler. http www.tracemodeler.com articles a quick introduction to uml sequence diagrams A Quick Introduction to UML Sequence Diagrams by Yanic Inghelbrecht http www.uml diagrams.org sequence diagrams.html UML 2 Sequence Diagrams http www.websequencediagrams.com A free Sequence Diagram web based tool By WebSequenceDiagrams.com http www.ckwnc.com ckwnc Web based UML Sequence Diagram creation tool References references UML DEFAULTSORT Sequence Diagram Category Unified Modeling Language diagrams id sequence diagram ca Diagrama de seq ncia de Sequenzdiagramm es Diagrama de secuencia fr Diagramme de s quence hi Sequence diagram it Sequence Diagram he lt Sekos diagrama ja pl Diagram interakcji pt Diagrama ...   more details



  1. Gene expression profiling

    of molecular biology , gene expression profiling is the measurement of the activity the gene expression ... 12 28 work ref measures the relative activity of previously identified target genes. Sequence based ... profiling. SuperSAGE is especially accurate and can measure any active gene, not just a predefined set. The advent of next generation sequencing has made sequence based expression analysis an increasingly ... Background Expression profiling is a logical next step after genome sequencing sequencing a genome the sequence tells us what the cell could possibly do, while the expression profile tells us what it is actually ... one to deduce a cell s type, state, environment, and so forth. Expression profiling experiments .... This is because altered levels of a specific sequence of mRNA suggest a changed need for the protein ... expression profiling experiments to help assess the drug s toxicity, perhaps by looking for changing ... 15123278 doi 10.1016 j.chembiol.2004.02.003 ref Gene expression profiling may become an important ... much messenger RNA is made from each gene, gene expression profiling provides the most global picture ... has an idea what is going on, a hypothesis , and he or she performs an expression profiling experiment ..., expression profiling takes place before enough is known about how genes interact with experimental ... profiling can help to identify a candidate hypothesis for future experiments. Most early expression profiling experiments, and many current ones, have this form ref cite journal author ... In general, expression profiling studies report those genes that showed statistically significant differences ..., financial constraints limit expression profiling experiments to a small number of observations ... of attaching biological significance to expression profiling results, but this remains a very difficult problem. The relatively short length of gene lists published from expression profiling experiments ... expression profiling results in a publicly accessible Microarray databases microarray database ...   more details




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