- Variome
The Variome is the whole set of genetic variation s found in populations of species that have gone through a relatively short evolution change. For example, among humans, about 1 in every 1,200 nucleotide base s differ. However, as the human species diverged only 10,000 years ago, this variation rate is comparatively small. In practice, the variome can be the sum of the single nucleotide polymorphisms SNPs of the population. Variomics is the study of variome and a branch of bioinformatics . Projects There are a number of international project studying the human variome, including the International HapMap Project and the Human Variome Project HVP . The HapMap Project aims to identify and catalog genetic similarities and differences among humans. The HVP aims to collect data on all human genetic variation. See also Single nucleotide polymorphism DNA sequence International HapMap Project OMIM Omics References http variome.net Variome.net Variome information portal site. http www.variome.org Human Variome Project http www.bio itworld.com newsitems 2006 may 05 12 06 human variome project Human Variome Project Set to Launch , May 12, 2006 http www.nature.com ng journal v39 n4 full ng0407 423.html What is the Human Variome Project? cite journal author Ring H, Kwok P, Cotton R title Human Variome Project an international collaboration to catalogue human genetic variation. journal Pharmacogenomics volume 7 issue 7 pages 969 72 year 2006 pmid 17054407 doi 10.2217 14622416.7.7.969 External links http www.hgvs.org Human Genome Variation Society http omics.org Omics.org General Omics topics http variomics.net Variomics.net The earliest variomics project site http personalgenome.net PersonalGenome.net openfree Personal Genome project home page Free Genome project Category Population genetics Category DNA Category Evolutionary biology ko ... more details
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- Human Variome Project
Image Hvplogo.png right thumb The Human Variome Project FAIR USE of Hvplogo.png see image description page at http en.wikipedia.org wiki Image Hvplogo.png for rationale The Human Variome Project HVP is the global initiative to collect and curate all human genetic variation affecting human health. Its mission is to improve health outcomes by facilitating the unification of data on human genetic variation and its impact on human health. Inception The HVP concept was conceived by Richard Cotton geneticist Professor Richard Cotton , a leader in the field of human genetic variation . His group, the Genomic Disorders Research Centre , based at the University of Melbourne and St Vincent s Hospital, Melbourne St. Vincent s Hospital , has established a consortium that covers genomic variation and its health implications in a comprehensive form. This consortium has encouraged the creation and supported many of the 571 gene specific variation database s currently available on the internet . However, these databases are of varying completeness and individualistic, so the Human Variome Project was born to establish a central project to encourage the collection and sourcing of this data, verifying it and ultimately using it for improved health outcomes. Geneticists, Diagnosticians, Researchers and Bio informatics scientists came together in June 2006 at the Human Variome Project Meeting, organized by Professor Cotton s team, and agreed take on the task of organising data collection and unifying the systems of data access and storage. This initiative builds on substantial pilot work and achievements ... access as well as collection systems that are open and accessible to all. The Human Variome Project ... for Arab Genomic Studies CAGS has initiated efforts to proceed with the Arab Human Variome Project under the Human Variome Project. CAGS was one of the participants of the HVP meeting in Melbourne ... the nature of work involved. See also Variome Human Genome Project Human genetic variation Population ... more details
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- HVP
HVP may refer to The Human Variome Project , established to analyze human genetic variation Hydrolyzed vegetable protein , used as a flavor enhancer Disambig ... more details
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- WAVe
Orphan date October 2010 cleanup date October 2010 File WAVe.png thumb WAVe logo WAVe stands for Web Analysis of the Variome is a next generation web based bioinformatics tool for the Human Variome Project human variome research domain. Availability WAVe is available for public usage at http bioinformatics.ua.pt WAVe and enables gene centric navigation over miscellaneous resources in a modern and agile web interface. Funding WAVe is being developed for the GEN2PHEN European GEN2PHEN Project by the http bioinformatics.ua.pt UA.PT Bioinformatics and Computational Biology group at the Aveiro University University of Aveiro . Architecture WAVe is based on a lightweight integration architecture ref http issuu.com pedrolopes docs linkintegrator ref and uses Arabella web crawler ref http issuu.com pedrolopes docs arabella ref combined with a Java based data gathering engine to aggregate multiple resources in a centralized database. References Reflist External links http bioinformatics.ua.pt WAVe WAVe Categories Category Bioinformatics Bioinformatics stub ... more details
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- Richard Cotton
Richard Cotton may refer to Richard Lynch Cotton 1794 1880 Sir Richard Cotton in or before 1497 1556 Richard Cotton, List of law clerks of the Supreme Court of the United States Richard Cotton geneticist , see Human Variome Project hndis Cotton, Richard ... more details
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- Centre for Arab Genomic Studies
Health Authority, the Dubai Islamic Affairs and Charitable Activities Department, the Human Variome ... was also held as part of the program of the conference. Human Variome Project CAGS was a participant in the preliminary meeting to discuss the conception of the Human Variome Project HVP , held ... of the 2006 Human Variome Project meeting Abstract Nature Genetics Bot generated title ref . Ever since, CAGS has actively worked towards the Arab Human Variome Project AHVP , in collaboration ... Human Variome Project Sheikh Hamdan bin Rashid Al Maktoum Award for Medical Sciences External ... more details
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- Microattribution
Orphan date January 2012 Use dmy dates date December 2011 The term microattribution a form of data citation was first defined as giving database accessions the same citation conventions and indices that journal articles currently enjoy . In the sense that the purpose of precise attribution is to extend the scholarly convention of giving citation credit, the provenance of a piece of scholarship observation or data deposition is recognized to give credit and priority to a preceding author. Microattribution is thus defined as a scholarly contribution smaller than a journal article being ascribed to a particular author or a small scholarly contribution being ascribed to a particular author . ref cite web title On microattribution url http blogs.plos.org mfenner 2011 08 28 on microattribution publisher Gobbledygook accessdate 3 October 2011 ref Of course, since data accessions can describe contributions that can vastly exceed research articles in size and quality, quantum attribution or precise citation might be better terms. Origin The concept was introduced in a February 2007 blog post http blogs.nature.com ng freeassociation 2007 02 duke of url.html 20 Duke of URL by Myles Axton. In the interests of giving credit to the resources geneticists find most useful, here are the numbers of papers citing the most frequently cited links The term was first used in an April 2007 editorial published in Nature Genetics . The Human Variome Project will need to introduce publishing innovations at both ends of the citation spectrum. It will need to track the citation of each variant s accession code in papers, database entries and across the web. This closing of the online publication loop might be termed microattribution. ref cite web title What is the Human Variome Project? url http www.nature.com ng journal v39 n4 full ng0407 423.html publisher Nature Genetics accessdate 26 October 2011 ref Subsequent editorials and blog posts elaborated the idea that the provenance of data access ... more details
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- GEN2PHEN
and accurate G2P depiction. This needs to change, and an international Human Variome Project HVP ... Web Analysis of the Variome Locus Reference Genomic LRG Locus Reference Genomic LRG Partners University ... more details
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- Genetic diversity
of diversity Genetic variation Genetic variability Human genetic variation Human Variome Project ... more details
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- International HapMap Project
Variome Project Human genetic variation External links http www.hapmap.org International HapMap Project ... more details
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- Single-nucleotide polymorphism
Variome TaqMan Affymetrix International HapMap Project tag SNP Short tandem repeat STR Snpstr Notes ... more details
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- List of acronyms and initialisms: H
protein Human Variome Project http www.wileyx.com High Velocity Protection http www.myspace.com northmemphishits ... more details
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- Human genetic variation
Isles Projects 1000 Genomes Project Human Variome Project International HapMap Project References ... more details
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