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ARMCX6

Armadillo repeat containing X-linked 6 is a protein that in humans is encoded by the ARMCX6 gene located on the X-chromosome.[1]

It is one of six armadillo repeats containing X-linked proteins (ARMCX1, ARMCX2, ARMCX3, ARMCX4, ARMCX5, and ARMCX6 (this protein)).

The function of this protein is unknown at this time.

Contents


Protein sequence

This is a diagonal plot of the protein displaying internal repeats.

      1 MGRAREVGWM AAGLMIGAGA CYCVYKLTIG RDDSEKLEEE      41 GEEEWDDDQE LDEEEPDIWF DFETMARPWT EDGDWTEPGA      81 PGGTEDRPSG GGKANRAHPI KQRPFPYEHK NTWSAQNCKN     121 GSCVLDLSKC LFIQGKLLFA EPKDAGFPFS QDINSHLASL     161 SMARNTSPTP DPTVREALCA PDNLNASIES QGQIKMYINE     201 VCRETVSRCC NSFLQQAGLN LLISMTVINN MLAKSASDLK     241 FPLISEGSGC AKVQVLKPLM GLSEKPVLAG ELVGAQMLFS     301 FMSLFIRNGN REILLETPAP 

Homology

ARMCX6 is conserved in many eukaryotic organisms.

Orthologs

taxonomic name common name NCBI entry Percentage of sequence similarity Length (AAs) comments
Homo sapiens Human http://www.ncbi.nlm.nih.gov/protein/33873720 100% 300 armadillo repeat containing X-linked 6
Macaca mulatta Rhesus monkey http://www.ncbi.nlm.nih.gov/protein/109131576 97.0% 300 PREDICTED: similar to amrmadillo repeat containing, X-linked 6 (H. sapiens)-like isoform 1
Equus caballus Horse http://www.ncbi.nlm.nih.gov/protein/149755221 90.0% 300 PREDICTED: similar to armadillo repeat containing, X-linked 6
Danio rerio zebrafish http://www.ncbi.nlm.nih.gov/protein/47086327 84.0% 301 Similar to RIKEN cDNA 0610039K22
Mus musculus House Mouse http://www.ncbi.nlm.nih.gov/protein/16359216 97.7% 393 armadillo repeat containing, X-linked 6 (H. sapiens)-like
Bos taurus cow http://www.ncbi.nlm.nih.gov/protein/118151322 83.0% 301 armadillo repeat containing, X-linked 6
Mus musculus Mouse http://www.ncbi.nlm.nih.gov/protein/56090483 82.0% 301 armadillo repeat containing, X-linked 6
Takifugu rubripes Tetradontoidea http://www.ncbi.nlm.nih.gov/protein/83817017 66.0% 818 aryl hydrocarbon receptor 2C
Caenorhabditis elegans C. elegans http://www.ncbi.nlm.nih.gov/protein/17564466 50.0% 332 Serpentine Receptor, class H family member (srh-216)
Saccharomyces cerevisiae Yeast http://www.ncbi.nlm.nih.gov/protein/6321297 70.0% 910 Hul5p
Gallus gallus Chicken http://www.ncbi.nlm.nih.gov/protein/118082062 52.0% 317 PREDICTED: hypothetical protein

Secondary Structure

The secondary structure of ARMCX6 is predicted to be similar to cyanase. A comparison of the two sequences is shown below.[2][3]

                           10        20        30        40                 ....*....|....*....|....*....|....*....|....*.. ARMCX6      231 MLAKSASDLKFPLISEGSGCAKVQVLKPLMGLSEKPVLAGELVGAQM 277 1DW9_A       19 LLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKL 65                  + +   ++ +  +  + + +   +   + +    +  +  ++++  

Cyanase segment having identity with ARMCX6.

Expression

Microarray data show that ARMCX6 is highly expressed during earliest stages of spermatogenesis in mice. [4][5][6]

References

Further reading






Source: Wikipedia | The above article is available under the GNU FDL. | Edit this article



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